| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0090 |
|---|
| Symbol | |
|---|
| ID | 4578612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 82819 |
|---|
| End bp | 83619 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639767408 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_913903 |
|---|
| Protein GI | 119382847 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATCA CCATTATCAC TGGGGATCAC CCGCGCCATC GCTATCTCGC GGATCGTCTG
GCAGAGGCCG GGATCCTGAC TGGCTGGATA ATCGAACAGC GCAAGCCCTT CGTGCCGGAG
GTTCCCGCTG GCCTTCCCGA CGACCTCGGC AGGCTTTTCG CGCTGCATTT CCGCCGGCGC
GAAGAGGCTG AGGAGCGCTT TTTCGGCCAG CCCTCGCTGC CTGACGGGCT GCGAATGCAT
TACGTTACTC CGGACAGTCT GAACGAGCAG GCGAGCGTTG ATTTCTTGAA GACCTGCGCG
CCGCGGATCG TTCTGTCCTA CGGCTGTCAC AAGATTGCCG ATGCCGTGAT GGCAGCCCTG
CCTGGGACAA CTTTCTGGAA CACCCATGGC GGCCTTTCAC CGCAATATCG GGGCGTAACC
ACGCATTTCT GGCCAAGCTA CATGCTGGAG CCGCAGATGA CCGGGATGAC CTTACACGAA
ACAACCTCTG CCATTGACGG AGGTGCTATT ATTCATCAGA CTGTTGCCCC ACTCGACCGC
AATGATGGAT TGCACGATAT CGCCGGACGT ACAGTCAAGG CCTATGCCGA TGAGTTGCCG
CCCCTGCTGA GAACCGTACT GGAACGGGAT CTACCTTCTG GGAAGGTACA GAAGACTAGC
GGGAAAATCT GGACCAGTGC CGACTGGCGG CCCGACCATC TCCGCCTGAT ATACGAAGTC
TATAATGATC GTATCGCGGC CGCCGCCGTT GATGGCCTTA TTCAAGGCCG TACGCCGATC
TGCATGAGCG TTCTTGCCTA G
|
|---|
| Protein sequence | MSITIITGDH PRHRYLADRL AEAGILTGWI IEQRKPFVPE VPAGLPDDLG RLFALHFRRR
EEAEERFFGQ PSLPDGLRMH YVTPDSLNEQ ASVDFLKTCA PRIVLSYGCH KIADAVMAAL
PGTTFWNTHG GLSPQYRGVT THFWPSYMLE PQMTGMTLHE TTSAIDGGAI IHQTVAPLDR
NDGLHDIAGR TVKAYADELP PLLRTVLERD LPSGKVQKTS GKIWTSADWR PDHLRLIYEV
YNDRIAAAAV DGLIQGRTPI CMSVLA
|
|---|
| |