| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0062 |
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| Symbol | |
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| ID | 4580939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 53670 |
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| End bp | 56297 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639767374 |
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| Product | ATPase |
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| Protein accession | YP_913875 |
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| Protein GI | 119382819 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.294718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATGG AAAAGTTCAC GGAACGGTCG CGGGGCTTCC TGCAAGCGGC GCAGACCATC
GCGATCCGCG AGGAAAACCA GCGCGTGATG CCCGAGCATC TGCTGAAGGC GCTGATGGAT
GACGATCAGG GCTTTGCCAG CAACCTGATC GCCCGGGCCG GCGGCGATGC CCAGGCCGTC
CGCCAGGCCG TCGATCAGGC GGTGGAGAAA CAACCCAAGG TCAGCGGCGG GCAGGGGCAG
GTCTATATCG ATCCCAGCAT GGTCCGCGTG CTGGACGAGG CCGAGAAGCT GGCCAAGAAG
GCCGGCGACA GCTTCGTTCC GGCCGAGCGC GTGCTGACCG CGCTGGCCAT CGTCAACACC
AATGCCCGTG ATGCGCTGGC TGCCGGCAAG GTGACCGCGC AGGCGCTGAA CTCGGCGATC
AACGATGTTC GCAAGGGTCG GACGGCCGAT ACCGCCAGCG CCGAGGACAG CTATGAGGCG
CTGTCGAAAT ACGCCCGCAA CCTGACCGAG GCCGCGGCCG AGGGAAAGAT CGACCCGATC
ATCGGCCGGG ACGAGGAAAT CCGCCGCGCC ATGCAGGTGC TGTCCCGCCG CACCAAGAAC
AACCCGGTGC TGATCGGCGA GCCGGGCGTC GGCAAGACCG CCATCGCCGA GGGCCTGGCG
CTGCGCATCG TCGATGGCGA CGTGCCCGAA AGCCTGCGCA ACAAGCAGCT TTGGGCGCTG
GACATGGGCG CGCTGATCGC CGGCGCGAAA TATCGCGGCG AGTTCGAGGA GCGGCTGAAA
TCCGTCCTGA AGGAGATCGA GAACGCCGCC GGCGAGATCG TGCTGTTCAT CGACGAGCTG
CATGTGCTGG TCGGTGCCGG CAAGACCGAC GGTGCCATGG ATGCCGCGAA CCTGATCAAG
CCCGCCCTGG CGCGGGGCGA GCTGCATTGC GTCGGTGCCA CCACGCTGGA CGAATACCGC
AAGTATATCG AAAAGGATGC TGCCCTGGCC CGGCGCTTCC AGCCGGTCAT GATCGAGGAG
CCGACGGTCG AGGACACGAT TTCGATCCTG CGCGGCATCA AGGAGAAATA CGAACTGCAT
CACGGCGTGC GCATCAGCGA TGCCGCGCTG GTGGCTGCCG CGACGCTGTC GCACCGCTAC
ATCACCGACC GTTTCCTGCC CGACAAGGCC ATCGACCTTA TGGACGAGGC CGCGAGCCGG
CTGCGCATGG AGGTGGACAG CAAGCCCGAA GAGCTTGACG CGCTGGACCG CCAGATCCTG
CAGATGCAGA TCGAGGCCGA GGCGCTGAAG AAAGAGGACG ACGCCGCCTC GCAGGACCGG
CTGGAGAAGC TGGAGAAGCA GCTTTCGGAA CTGCAGGAGA AATCCGCGAC CATGACGGCG
CGCTGGCAGG CCGAGCGCGA CAAGCTGGAA GGCTCGCGCA ACCTCAAGGA GCAGCTCGAC
CGTGCCCGCG CCGAGCTGGA CCAGGCCAAG CGCGAGGGCA ACCTGGCCCG CGCCGGCGAA
CTCAGCTATG GCATCATTCC CGGGCTGGAG CGGCAACTGG CCGAATCCGA AGGCAGCGAG
GACGGCCCGA TGGTCGAGGA AGCCGTCCGC CCCGAGCAGA TCGCCGAGGT GGTGGAACGC
TGGACCGGCA TCCCCACCAG CAAGATGCTG GAGGGCGAGC GCGAGAAGCT GCTGAAGATG
GAGGATGTGC TGAGCAAGCG CGTCATCGGC CAGTCCGAGG CGGTGACCGC GATCTCGAAC
GCGGTGCGCC GGGCGCGGGC GGGGCTGAAC GACCCCAAGC GGCCGCTGGG CAGCTTCCTG
TTCCTGGGTC CGACCGGGGT CGGCAAGACC GAGCTGACCA AGGCCATCGC CGAATACCTG
TTCGACGACG ACAGCGCCAT GGTCCGCATC GACATGTCCG AGTTCATGGA GAAGCATTCG
GTCGCGCGGC TGATCGGCGC GCCTCCGGGT TATGTCGGCT ATGACGAGGG CGGTGTGCTG
ACCGAGGCGG TGCGGCGGCG TCCCTATCAG GTCATCCTGT TCGACGAGGT CGAAAAGGCG
CACCCGGACG TGTTCAACGT GCTGTTGCAG GTTCTGGACG ACGGCCAGCT GACCGACGGC
CAGGGCCGTA CTGTGGACTT CAAGCAGACG CTGATCGTGC TGACCTCGAA CCTTGGGGCG
CAGGCGCTGT CGGCGCTGCC GGAGGGGGCG GATTCGGGCC AGGCCCGCGC GCAGGTCATG
GATGCGGTCC GGGCGCATTT CCGGCCCGAG TTCCTGAACC GGCTGGACGA GATCATCATC
TTCCACCGGC TCACGCGCGA GAACATGGAC GGGATCGTCA GGATCCAGCT CTGGCAGCTG
GAAACCCGTC TCGCGCAGCA CAAGATCGGG CTGGATCTGG ACGAGGCGGC GCTGAAATGG
CTGGCGGACG AAGGCTATGA CCCGGTCTTC GGTGCCCGGC CCTTGAAGCG GGTGATGCAG
CGCAGCCTGC AAAACCCCCT GGCCGAGATG ATCCTGGCCG GCGAGGTGCT GGATGGCCAG
ACCGTGCATG TCAGCGCCGG ACCCGATGGC CTGATCGTGG GCAACCGCGT GAGCACCGCC
CATCTGGGCC CGGCGGATGA AAGCGGGCCG CGGGTGCCGC TGCACTAA
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| Protein sequence | MDMEKFTERS RGFLQAAQTI AIREENQRVM PEHLLKALMD DDQGFASNLI ARAGGDAQAV
RQAVDQAVEK QPKVSGGQGQ VYIDPSMVRV LDEAEKLAKK AGDSFVPAER VLTALAIVNT
NARDALAAGK VTAQALNSAI NDVRKGRTAD TASAEDSYEA LSKYARNLTE AAAEGKIDPI
IGRDEEIRRA MQVLSRRTKN NPVLIGEPGV GKTAIAEGLA LRIVDGDVPE SLRNKQLWAL
DMGALIAGAK YRGEFEERLK SVLKEIENAA GEIVLFIDEL HVLVGAGKTD GAMDAANLIK
PALARGELHC VGATTLDEYR KYIEKDAALA RRFQPVMIEE PTVEDTISIL RGIKEKYELH
HGVRISDAAL VAAATLSHRY ITDRFLPDKA IDLMDEAASR LRMEVDSKPE ELDALDRQIL
QMQIEAEALK KEDDAASQDR LEKLEKQLSE LQEKSATMTA RWQAERDKLE GSRNLKEQLD
RARAELDQAK REGNLARAGE LSYGIIPGLE RQLAESEGSE DGPMVEEAVR PEQIAEVVER
WTGIPTSKML EGEREKLLKM EDVLSKRVIG QSEAVTAISN AVRRARAGLN DPKRPLGSFL
FLGPTGVGKT ELTKAIAEYL FDDDSAMVRI DMSEFMEKHS VARLIGAPPG YVGYDEGGVL
TEAVRRRPYQ VILFDEVEKA HPDVFNVLLQ VLDDGQLTDG QGRTVDFKQT LIVLTSNLGA
QALSALPEGA DSGQARAQVM DAVRAHFRPE FLNRLDEIII FHRLTRENMD GIVRIQLWQL
ETRLAQHKIG LDLDEAALKW LADEGYDPVF GARPLKRVMQ RSLQNPLAEM ILAGEVLDGQ
TVHVSAGPDG LIVGNRVSTA HLGPADESGP RVPLH
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