Gene Pden_0061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0061 
Symbol 
ID4579092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp52790 
End bp53563 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content65% 
IMG OID639767373 
Producthypothetical protein 
Protein accessionYP_913874 
Protein GI119382818 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.484003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTCA ACATCACCAT CCAGCGCGAC CCGGAAGATC CTCGATCCGG CCCTATCACC 
GTCGGCTGGT TGCGGGCAAC CGACAAAGGC GGGGTGCTGT TCGAACCGCC CGAGCGCGTG
TCCTTTCGCG ACACCAACCG CGCGAGTGCG AAATCCGCCG CGCGCTGCCC GGCGGTGATC
GCGCTGGAAG CGCGCTATTT CATGATCAAG TGCCCGTTCG ACCTGCATAT CGGCTTTGAC
CGCGACGAGC AGGGGCGGGC CAGGCTCATC AACCGCGCCG GTGCCGCAGG CGCGGTCCGC
AGCGGCCGCA TGTCCGACGT GCTGGTGCTG GTGAGCGAGG CCGAGTGGCG CTATCCCGAC
CGGCCGACGA TCCAGATGAA GCTGCCCTAT ATCTTCATCG CGGACGAGCC GGTCTATATG
ACCCAGCTGG ACAGCTTTGC GCATTACCGG CGCCGTCCCC TGCCGGGCAC GATCTTCGGC
GGGCGCTTTC CCATCAATAT CTGGCCGCGC CAGTTGATGT GGGCCTTCGA ATGGCACGAA
ACCGACAAGG ACCTGATCCT CAAGCGCGGC GAGCCGCTGT TCTACGTCCA GCTGGAGGGC
GACGGTCCCG AGCGTCCCTT GCAGCTTGTC GAGGCCGAGC GCACGCCGGA ACTGCAAAGC
TATATCGACC ATGTCTCGGG CGTCGTGAAC TTTGCCAACC AGACCTTCTC GCTGTTCAGG
GCTGCCGAGG CGGCACGCCC GGCCAGGCTG CTGGTTGCGA AACAACGTCG CTGA
 
Protein sequence
MQFNITIQRD PEDPRSGPIT VGWLRATDKG GVLFEPPERV SFRDTNRASA KSAARCPAVI 
ALEARYFMIK CPFDLHIGFD RDEQGRARLI NRAGAAGAVR SGRMSDVLVL VSEAEWRYPD
RPTIQMKLPY IFIADEPVYM TQLDSFAHYR RRPLPGTIFG GRFPINIWPR QLMWAFEWHE
TDKDLILKRG EPLFYVQLEG DGPERPLQLV EAERTPELQS YIDHVSGVVN FANQTFSLFR
AAEAARPARL LVAKQRR