Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0041 |
Symbol | |
ID | 4578895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 32931 |
End bp | 33908 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639767352 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_913854 |
Protein GI | 119382798 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.161257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGA TCACCATCCT GGGCTCTGGG GTGATGGGGC TTTGCATCGC CACCGAACTG GCCGCACGCG GAATCGCGCC GCGCATCATC GACCCCGCCG GCAAGCCCGG CTCACAGGCC TGCAGCTGGC GCGCCGGGGG CATGCTGGCG CCTTATTGCG AGGCGGAAAG CGCCGAGCCG GTGGTCCTGC GCCTGGGCGT CGATGCCGCA GACTGGTGGC AGGCGAACGG CGCCGAAGTC GACCGTCGCG GCACGCTGGT CCTGGCCCCC TCGCGCGACC GGACGGAACT CGACCGCTTC GCCCGGCTGA CCGAGGCGCA TCAGCCCGTC ACTGCCGAGG AAATCGCGGC GCTGGAGCCC GAGCTGGCCG GCCGTTTCCC GCGCGGGCTG CATTTCGCCA CCGAGGCGCA TCTGAACCCG CGCGCCGCAC TGCTGGCGCT GCGCGACCGG CTGGAGGAGC GTGGCATCCG CATCGAGACC GAGGGCAATC CCACCGGGAT GGTCGTCGAT GCACGCGGCC TTGCCGCCCG CGACGAACTC CACGACCTGC GCGGCGTGCG CGGCGAGATG CTGGTGATCC GCTGCCCCGA GGTGACCCTG ACCCGCACCG TCCGCCTGCT GCATCCGCGC ATCCCGCTTT ATGTCGTGCC GCGCGGCGAG GGCGTCTACA TGATCGGCGC CACCATGCTG GAGACCGGCG GCAAGTATCG CGTCACCGCC CGCTCGGCGG TCGAGATGCT TTCTGCCGCC TATGCCCTGC ATCCCGGCTT TGCCGAGGCC GAGATCCTGG AGCTTGGCTC GGATGCGCGC CCCGCATTCC CCGACAACCT GCCCCGCCTG CGTCGGCGCG GCGGCACGCT TTACGCAAAC GGCCTTTACC GCCACGGCTA TCTTCTGGCC CCCGCCGTGG CCCGCATGGC CGCCGATTAC CTTGTCGAGG GCCGGAAACC GGAGTTCATG GATGAAGATC ACCCTTAA
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Protein sequence | MNQITILGSG VMGLCIATEL AARGIAPRII DPAGKPGSQA CSWRAGGMLA PYCEAESAEP VVLRLGVDAA DWWQANGAEV DRRGTLVLAP SRDRTELDRF ARLTEAHQPV TAEEIAALEP ELAGRFPRGL HFATEAHLNP RAALLALRDR LEERGIRIET EGNPTGMVVD ARGLAARDEL HDLRGVRGEM LVIRCPEVTL TRTVRLLHPR IPLYVVPRGE GVYMIGATML ETGGKYRVTA RSAVEMLSAA YALHPGFAEA EILELGSDAR PAFPDNLPRL RRRGGTLYAN GLYRHGYLLA PAVARMAADY LVEGRKPEFM DEDHP
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