Gene Pden_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0040 
Symbol 
ID4578894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp32750 
End bp32947 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content72% 
IMG OID639767351 
Productthiamine biosynthesis protein ThiS 
Protein accessionYP_913853 
Protein GI119382797 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2104] Sulfur transfer protein involved in thiamine biosynthesis 
TIGRFAM ID[TIGR01683] thiamine biosynthesis protein ThiS 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.12194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA CCCTTAACGG AGCGGCGCGC GACCTGACCG GCCCGACCGT GCAGGACGCG 
CTGGCCGAGA TCGGACTGGG CGCGGCCAAG GTGGCGACGG CGCTGAACGG CGCCTTCCTG
CCCGCCGCCG CGCGACCCGA AACCACGCTG AAAGACGGCG ACGCGCTGGA AGTCGTGGCG
CCGATGCAGG GGGGCTGA
 
Protein sequence
MKITLNGAAR DLTGPTVQDA LAEIGLGAAK VATALNGAFL PAAARPETTL KDGDALEVVA 
PMQGG