Gene Pden_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0037 
Symbol 
ID4578891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp30432 
End bp31394 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content72% 
IMG OID639767348 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_913850 
Protein GI119382794 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCT ACGCCCGCCA GATGGTCCTG CCCGAGGTCG GCGCCGAGGG GCAGGAACGC 
ATCGCCGCCG CCCATGCGCT GGTCGTCGGC GCGGGCGGGC TGGGCGTGCC GGTGCTGCAA
TACCTGGCCG GAGCCGGCAT CGGGCGCATC ACCCTGGTGG ACCCCGACAC GGTCGAGGAA
TCGAACCTGC ACCGCCAGCC GCTTTACCGC ATGAAGGATA TCGGCCAGCC CAAGGTCCGC
GCCGCAGCGC AGGCCGTGGC CCGGCTGAAT CCTGCGGTGG AAATCGAGGC GCTGGCGGAC
CGTCTGACAC CCCTGAACGC GCCTGTTCTG GTCGCGGCGG CAAATGTGGT GCTGGATTGC
GCCGACAGCT ATGCCGCCAG CTATACGCTG TCGGATGCCT GCCTCGCGGC GGGCAAGCCG
CTGATCTCGG CCTCGGCCCT GGGGCTTGCG GGCTATGTCG GCGGCTTCTG TGGGGGCGCC
CCCAGTCTGC GGGCGCTGTT CCCCGACCCG CCCGACAGCG GCCAGACCTG CGCCACGGCC
GGGGTGCTGG GCCCGGTGGT CGGGATGCTC GGCTGCATCC AGGCGCAAAT GGCGCTGCGA
CTGCTTCTGG GCACGACCCC CTCTCCCCTG GGCGAATTCA TCCGCTTCGA CAACGGCCGC
TTCACGCAGT TCCGTTTCGA TGCCGCACCC GAGGCCGACG GCCCGCGCTT CATCGCCCGC
GAGGACATCC GCGCGGCCGA CCTGGTCATC GACCTGCGCC CCGAGGACGA GGCGCCGCGC
AAGGCCACGC CGGACGCGCT GCGCATCCCC GGCTACGGTG CCGCCGGCCC CCTGCCCGAT
CCCGGCCAGC GCGTGGTGCT GGCCTGTCGT TCCGGCCTGC GCTCATGGCG CGCCGCCGAC
GCCCTGTCCC GCCGCTGGAG CGGCGAGATC ACCCTTCTTG CCCTTGGAGA CGACGACCGA
TGA
 
Protein sequence
MNRYARQMVL PEVGAEGQER IAAAHALVVG AGGLGVPVLQ YLAGAGIGRI TLVDPDTVEE 
SNLHRQPLYR MKDIGQPKVR AAAQAVARLN PAVEIEALAD RLTPLNAPVL VAAANVVLDC
ADSYAASYTL SDACLAAGKP LISASALGLA GYVGGFCGGA PSLRALFPDP PDSGQTCATA
GVLGPVVGML GCIQAQMALR LLLGTTPSPL GEFIRFDNGR FTQFRFDAAP EADGPRFIAR
EDIRAADLVI DLRPEDEAPR KATPDALRIP GYGAAGPLPD PGQRVVLACR SGLRSWRAAD
ALSRRWSGEI TLLALGDDDR