Gene Pden_0035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0035 
Symbol 
ID4578889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp28793 
End bp29467 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID639767346 
ProductTenA family transcription regulator 
Protein accessionYP_913848 
Protein GI119382792 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCT ACGGCCATGC CTTTGCAGCC TGGCGGGCCG AGGCGCAGCC CGACTGGGAC 
GCCTATACCC GCCACCCCTT CGTCGAGGGG CTGCGCGACG GCACGCTGCC GCAATCCCGC
TTTCTGACCT ATCTGGTGCA GGACTACCTG TTCCTGAAGA ACTTCTCGCG CGCCTGGGCG
CTGGCCGTGG TCAAGGCCGG CGACCTGGAC GAGATGCGGG CCTGTTCCGC GACGGTCCAC
ACGCTGCTCG ACCACGAGAT GAGCCTGCAT GTCCAGACCT GCGCCCGCGC CGGCATGGGC
CCCGAGGTGC TGGCCGATGC GCAAGAGGCC GTCACCAATA TCGCCTATAC CCGCTATGTG
CTGGAGGCCG GCTATTCGGG CGATTTCCTT GATCTCCTGG CGGCGCTGAT GCCCTGCGTG
ATCGGTTACG GCGAAATCGG GCTGCGGCTG GCGACCGAGG CGACGCCCGA CACGCCCTAT
CGCGAATGGA TCGACACCTA TGCCGGCGCG GAATACCAAG CCGCCTGCGT TTCGGCCGGC
GCGTTGCTGG ACAGCGCCAT CCGCAAGCGG CTGGGCGAGG CGCCCGAGAA AAGCCCGCGT
TGGGCCGCGC TGTCGGATCG CTTCGCCACC GCCACACGGC TCGAAGTCGC CTTCTGGGAA
CTGGGCCGCG AATGA
 
Protein sequence
MNRYGHAFAA WRAEAQPDWD AYTRHPFVEG LRDGTLPQSR FLTYLVQDYL FLKNFSRAWA 
LAVVKAGDLD EMRACSATVH TLLDHEMSLH VQTCARAGMG PEVLADAQEA VTNIAYTRYV
LEAGYSGDFL DLLAALMPCV IGYGEIGLRL ATEATPDTPY REWIDTYAGA EYQAACVSAG
ALLDSAIRKR LGEAPEKSPR WAALSDRFAT ATRLEVAFWE LGRE