| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0017 |
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| Symbol | |
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| ID | 4578558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 14426 |
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| End bp | 15061 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639767328 |
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| Product | endopeptidase Clp |
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| Protein accession | YP_913830 |
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| Protein GI | 119382774 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAAGC ATTTCCACCT GGACGACGAT GACGACGATG ACGACGAGCG CCGCCAGGAA
GGGTCTAAGG ACGAGGGGCT CGGCCTGCCC GAGGGCGACA AGATCGGCAA GCTCTATTTC
AAGTCGCGCA CGGTGATCGT TGCCGGGCCG ATCACCGACA AGCTGGCGCA GCGCACCGTG
GCGCATCTGC TGGCCCTGGC CGAGGACAGC GACGAGCCGA TCAACATGCT GATCTCGTCG
CCCGGCGGCC ATGTCGAATC CGGCGACATG ATCCATGACG TGATAAAGTT CATCCGCCCG
ACCGTGCGCA CCATCGGCTC GGGCTGGGTC GCCTCGGCCG GCGCGCTGAT CTTTGTCGGC
GCGGACAAGG AAAACCGCTA TTGCCTGCCC AACACCCGCT TCCTGATCCA CCAGCCCTCG
GGCGGGATCG GCGGCACGTC CACGGACATG ATGATCCAGG CCGAGCAGGT GCGGCTGATG
CGCGACCGGC TGAACCAGAT CTTTGCCGAG GCCACCGGCC AGCCGGTCGA GCGGATCGAA
AAGGACACCC AGCGCGACTT CTGGCTGAAC ACGCAAGAGG CGCTGGACTA CGGCCTCCTG
GGCAAGGTCA TCCGCTCGGT GGACGAGCTG AAATGA
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| Protein sequence | MAKHFHLDDD DDDDDERRQE GSKDEGLGLP EGDKIGKLYF KSRTVIVAGP ITDKLAQRTV
AHLLALAEDS DEPINMLISS PGGHVESGDM IHDVIKFIRP TVRTIGSGWV ASAGALIFVG
ADKENRYCLP NTRFLIHQPS GGIGGTSTDM MIQAEQVRLM RDRLNQIFAE ATGQPVERIE
KDTQRDFWLN TQEALDYGLL GKVIRSVDEL K
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