Gene Pden_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0010 
Symbolrph 
ID4578551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp9211 
End bp9936 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content67% 
IMG OID639767321 
Productribonuclease PH 
Protein accessionYP_913823 
Protein GI119382767 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0689] RNase PH 
TIGRFAM ID[TIGR01966] ribonuclease PH 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCC CCTCTGGCCG GAATTTAAGT GATATGCGCC CGATTTCAAT CGAAACGGGC 
ATCATGCGCC ATGCCGAGGG CTCTTGCCTG ATCTCTTGCG GCGACACCCG CGTGCTGTGT
TCGGCCAGCA TCGAGGAGAA GGCGCCGCCC TTCCTGAAAG GGTCGGGCCA GGGCTGGGTG
ACGGCAGAAT ATGGCATGCT GCCGCGCGCG ACCAACACCC GCAACCGGCG CGAGGCGGCG
GCCGGCAAGC AATCCGGCCG CACCCAGGAA ATCCAGCGCC TGATCGGCCG TGCGCTGCGT
GCCGGGGTGG ACCGCCGGGC CCTGGGCGAG CGGCAGATCG TCGTCGATTG CGACGTGATC
CAGGCCGATG GCGGCACCCG CTGCGCCGCG ATCACCGGCG GCTGGGTGGC GCTGCGGCTG
GCGATGAACA AGCTGCTCAA GGCCGGCATC GTCACCGCCG ATCCGATCAT GGACCATGTC
GCTGCCGTGT CCTGCGGCAT CTATGCCGGG CAGCCGATCC TGGACCTGGA CTATGCCGAG
GACAGCGAGG CCGGCACCGA CGGCAATTTC ATCATGACCG GGGCAGGGCG GCTGATCGAG
GTGCAGATGT CGGCCGAGGG TGCCACCTTC TCGCGTCCCG AGATGAACCA GTTGCTCGAT
CTGGCCGAAG CCGGCATCGC CGAACTGGTC CGCGCCCAGA ACGAGGCCGT GGCATGCGCA
GGCTGA
 
Protein sequence
MMRPSGRNLS DMRPISIETG IMRHAEGSCL ISCGDTRVLC SASIEEKAPP FLKGSGQGWV 
TAEYGMLPRA TNTRNRREAA AGKQSGRTQE IQRLIGRALR AGVDRRALGE RQIVVDCDVI
QADGGTRCAA ITGGWVALRL AMNKLLKAGI VTADPIMDHV AAVSCGIYAG QPILDLDYAE
DSEAGTDGNF IMTGAGRLIE VQMSAEGATF SRPEMNQLLD LAEAGIAELV RAQNEAVACA
G