Gene Pden_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0007 
Symbol 
ID4578548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp6517 
End bp7395 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content62% 
IMG OID639767318 
ProductparB-like partition proteins 
Protein accessionYP_913820 
Protein GI119382764 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGA ACAAGCTTGA AAAGCGCGGT CTGGGCCGTG GATTGTCGGC GTTGATGGCC 
GATGTGGATC TGATTCCTTC CGAGCGTCCC GCGCCCCGGC AGATCCTTCC GGTCGAACAG
CTGACGCCGA ACCCGGATCA GCCTCGCCGC AGTTTTGCCC CTGAAGCGTT GCAGGAGCTT
GCCGATTCGC TAAAGACTCG CGGCATGCTG CAGCCGTTGA TCGTGCGCCC GCATCCGACC
GATCGCGGCC TTTACCAGAT CGTTGCTGGC GAGCGCCGTT GGCGTGCCGC TCAGATCGCC
CAGCTCCATG AGGTGCCGGT CATCGTTCGC GATCTGAACG ATACGGAAGT GCTGGAAGTC
GCCATTGTCG AGAACATCCA GCGTGCCGAC CTGAACGCGA TCGAGGAGGC GGCTTCTTAT
CGCCAGCTCA TGGACAGGTT CGGCCACACC CAGGAAAAGC TGGGCGAGGC GCTTAACAAG
AGCCGCAGCC ATATCGCCAA CCTGCTGCGG CTGCTGAACC TGCCGGAGCA GGTGCAGGCC
TGGCTCAAGG AAGGCAAGCT GACTGCCGGC CATGCCCGGG CGCTGATTAC CGCATCCAAT
GCCGTCGAGC TTGCGCGCAA GGTGATCGAG AAGAACCTTT CCGTGCGCGA GACTGAAGAA
CTGGTGCGTC GCCAAGCCGA AGGCCCCAAG GCGCAGAAAT CCAGGAGCGC CAGCCAGGAA
AAGGATGCCG ACACCCGCGC GCTGGAAGGC GATTTGACCG CGCATCTCAA GATGAAGGTG
GCGATCAACC ATTCCGGGAC CGACGGTGGC CAGCTTGTGA TCACCTATCG CGACCTTGAT
CAGCTTGATC GTCTTTGCCA GATCCTTGCC GGCGACTGA
 
Protein sequence
MAENKLEKRG LGRGLSALMA DVDLIPSERP APRQILPVEQ LTPNPDQPRR SFAPEALQEL 
ADSLKTRGML QPLIVRPHPT DRGLYQIVAG ERRWRAAQIA QLHEVPVIVR DLNDTEVLEV
AIVENIQRAD LNAIEEAASY RQLMDRFGHT QEKLGEALNK SRSHIANLLR LLNLPEQVQA
WLKEGKLTAG HARALITASN AVELARKVIE KNLSVRETEE LVRRQAEGPK AQKSRSASQE
KDADTRALEG DLTAHLKMKV AINHSGTDGG QLVITYRDLD QLDRLCQILA GD