| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0004 |
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| Symbol | |
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| ID | 4578545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 3298 |
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| End bp | 5157 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639767315 |
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| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
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| Protein accession | YP_913817 |
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| Protein GI | 119382761 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
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| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACAAT TCGACGTAAT CGTGATTGGT GGAGGCCATG CCGGCGTGGA AGCGGCCATG
GCTGCGGCCC GCATGGGTGT GAAAACCGCG CTGGTCACGT TGCACCGCGA CGATATCGGC
ACCATGTCCT GCAACCCTGC GATCGGGGGG CTGGGAAAGG GCCATCTGGT CCGAGAAATC
GACGCGCTCG ATGGAGTCAT GGGGAAACTC GCCGATACCG CCGGCATTCA GTTTCGGCTT
TTGAACCGAC GCAAGGGTCC TGCCGTGCAA GGGCCTCGTG CACAGGCGGA TCGCAAGCTT
TATCGTTCGG CTGCGGCGAA GATAGTGGCC GGACAGGACG GTCTGTCTCT GATCCTGGGC
GAGGCTGCCG AATTACTGCA TGAGCGTGGC CAAGTCACCG GCTTGCGGCT GGCCGATGAT
AGCGAATTGC AGGCGCGGCA GATCATCCTG ACCACCGGAA CATTCCTGAA CGGTTTGATT
CACATAGGGG AAATCAGCCG CCAAGCAGGC CGCTGGGGCG GGTCCACCTC CGTGACCTTG
GCCGCTTCGC TTCGTCCGTT GAACCTGCCG CTGGGGAGGT TGAAGACCGG AACGCCTCCG
CGCATTCTGC GGCAGAGCAT CGATTGGGAG AGCCTGCATC AGCAGCCGGG TGATGAAGAA
CCGGTGATGT TCTCTTACCT GAATACGGTG CCGGAAGCTC CGCAAGTCAG CTGCGCGATC
ACGCATACCA ACCCCGACAC ACACCGAATA ATTCGCGAAA ACCTTGCGCG ATCAGCGATG
TATGGGGGGC GGATCGATGG CGTGGGACCG CGATACTGCC CTTCGATTGA GGACAAGGTC
GTCCGTTTTG CCGACAAGGA ATCGCATCAG ATCTTCCTGG AGCCGGAAGG TCTGGATAGC
GATCTTGTCT ATCCAAACGG GATTTCGACG TCTTTGCCGG AAGATATCCA ACTCGCTTAC
GTCCGTTCAA TCCGCGGTCT CGAGCGGGCG CAGATCGCGC AGCCGGGCTA TGCGGTGGAA
TATGACTATG TCGACCCGCG TGCCTTGGCT GCGTCGCTGG AGGTCAAGAA TTTGTCAGGG
CTGTTCCTGG CCGGGCAGAT CAACGGCACG ACGGGTTATG AAGAGGCGGC GGCGCAAGGG
CTGGTCGCTG GTCTCAATGC GGCATTGAAG GCGCAAGGCC GCGAGGCGTT GCATTTCAGC
CGGTCGCAAA GCTATATCGG GGTGATGATC GATGATCTCA CCACGCGCGG TGTCAGCGAG
CCCTATCGCA TGTTCACATC GCGTGCCGAA TTCCGGCTCT CGCTTCGGGC GGATAACGCT
GATCAGCGTT TGACGCCTTT TGGTATCGAT ATTGGCTGTG TCGGCCAGGA GCGCAGAGCG
GCATTCTCTG AAAAGATGCG GCGCTATACT GCGGCGCGGG ACCGTGCCGA GTCCGTATCC
TTTACTCCGA CGGAGCTTTC CCGTTCGGGG ATCGAGGTGC GTCACGATGG GGCTCGACGC
AGCCTGTTTG CTCTGCTGGC TCAGCAGGAA ATACCGCAAG ATCAAGTCCT TGCACTGGAT
GATCAGCTTG TATTGCAAGA TCCCGCCATC ATCCGCCAGT TGGCCACAGA TGCGCTTTAT
CATCAGTATA CGGACCGTCA GGGCAAGGAT GCCGAGCTGC TCCGAAAGGA AGAGGCAGTA
GCCATACCAG CCGAGTTTGA TTACGACGCG CTTTCTGGCC TGTCCAACGA ACTCAAATTC
AAGCTGAACC AACATCGCCC GGCGACGCTG GCTGCCGCTG CGAATATCGA GGGGATGACC
CCGGCTGCGC TGACCTTGAT CCTCGCCGTG ATCCGTGCCG GCAATCGCCG CAGCGCCTGA
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| Protein sequence | MKQFDVIVIG GGHAGVEAAM AAARMGVKTA LVTLHRDDIG TMSCNPAIGG LGKGHLVREI
DALDGVMGKL ADTAGIQFRL LNRRKGPAVQ GPRAQADRKL YRSAAAKIVA GQDGLSLILG
EAAELLHERG QVTGLRLADD SELQARQIIL TTGTFLNGLI HIGEISRQAG RWGGSTSVTL
AASLRPLNLP LGRLKTGTPP RILRQSIDWE SLHQQPGDEE PVMFSYLNTV PEAPQVSCAI
THTNPDTHRI IRENLARSAM YGGRIDGVGP RYCPSIEDKV VRFADKESHQ IFLEPEGLDS
DLVYPNGIST SLPEDIQLAY VRSIRGLERA QIAQPGYAVE YDYVDPRALA ASLEVKNLSG
LFLAGQINGT TGYEEAAAQG LVAGLNAALK AQGREALHFS RSQSYIGVMI DDLTTRGVSE
PYRMFTSRAE FRLSLRADNA DQRLTPFGID IGCVGQERRA AFSEKMRRYT AARDRAESVS
FTPTELSRSG IEVRHDGARR SLFALLAQQE IPQDQVLALD DQLVLQDPAI IRQLATDALY
HQYTDRQGKD AELLRKEEAV AIPAEFDYDA LSGLSNELKF KLNQHRPATL AAAANIEGMT
PAALTLILAV IRAGNRRSA
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