| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0002 |
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| Symbol | rho |
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| ID | 4579420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 709 |
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| End bp | 2013 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639767313 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_913815 |
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| Protein GI | 119382759 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00303251 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.950818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCGGA TAGTGCGCGC CCATAGGCTA GACATGACCG AAGAACGCCT CAACCTGTCC
GATCTCAAGG CCAAGAGCCC GGCCGACCTG CTGGCCATGG CCGAGGAGTG GGAAATCGAG
AACGCCTCGA CCATGCGCAA GGGCGAGATG ATGTTCTCGA TCCTCAAGGA GCATGCCGAG
GAAGGCTTCG AGATCGGCGG CGACGGCGTG CTGGAGGTTG TCCAGGACGG TTTCGGCTTC
CTGCGCTCGC CCGAGGCGAA CTATCTGCCA GGGCCCGACG ACATCTATGT CAGCCCCGAC
ATGATCCGCC AGCACAGCCT GCGCACCGGC GACACGGTCG AGGGCGTGAT CCGCGCCCCG
GGCGAGAACG AACGGTATTT CGCCCTGACC AAGGTCGAGA AGATCAACTT CGAGAATCCC
GAGAAAGCCC GCCACAAGGT CGCCTTCGAC AACCTGACGC CGCTTTATCC GAACGAACGC
CTGAAGATGG AGATCGAGGA TCCGACCATC AAGGACCGTT CGGCCCGGAT CATCGACCTG
GTGGCGCCGA TCGGCAAGGG CCAGCGTTCG TTGATCGTGG CGCCGCCGCG CACCGGCAAG
ACGGTGTTGC TGCAGAACAT CGCCCATTCG ATCGAGAAAA ATCACCCGGA ATGCTATCTG
ATCGTGCTGC TGATCGACGA GCGGCCGGAA GAGGTGACCG ATATGCAGCG TTCCGTGAAA
GGCGAGGTGA TTTCCTCGAC CTTCGACGAA CCGGCCAGCC GGCACGTCGC CGTGTCGGAG
ATGGTGATCG AGAAGGCCAA GCGCCTTGTC GAACATAAAC GAGATGTTGT GATTCTTCTG
GATTCTATCA CAAGACTTGG TAGAGCCTTC AACACCGTGG TGCCTAGTTC GGGCAAGGTC
CTGACCGGCG GTGTCGACGC GAATGCCTTG CAGCGTCCGA AGCGATTCTT TGGCGCGGCC
CGGAATATCG AAGAGGGCGG TTCGCTGACC ATCATCGCTA CGGCGCTGAT CGATACCGGC
TCGCGTATGG ATGAGGTGAT CTTCGAGGAA TTCAAGGGCA CCGGCAACAG CGAGATCGTG
CTGGATCGCA AGGTGGCCGA CAAGCGCGTG TTCCCGGCCA TGGATATTCT CAAGTCCGGC
ACCCGCAAAG AAGAATTGCT GGTCGATGCC AAGGATCTGC AAAAGACCTA TCTGCTGCGG
CGCATCCTGA ACCCGATGGG GACCACGGAT GCCATCGAAT TCCTGATCTC GAAGCTGAAG
CAGACCAAGA CCAATGGCGA ATTCTTCGAT TCGATGAACG CCTGA
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| Protein sequence | MRRIVRAHRL DMTEERLNLS DLKAKSPADL LAMAEEWEIE NASTMRKGEM MFSILKEHAE
EGFEIGGDGV LEVVQDGFGF LRSPEANYLP GPDDIYVSPD MIRQHSLRTG DTVEGVIRAP
GENERYFALT KVEKINFENP EKARHKVAFD NLTPLYPNER LKMEIEDPTI KDRSARIIDL
VAPIGKGQRS LIVAPPRTGK TVLLQNIAHS IEKNHPECYL IVLLIDERPE EVTDMQRSVK
GEVISSTFDE PASRHVAVSE MVIEKAKRLV EHKRDVVILL DSITRLGRAF NTVVPSSGKV
LTGGVDANAL QRPKRFFGAA RNIEEGGSLT IIATALIDTG SRMDEVIFEE FKGTGNSEIV
LDRKVADKRV FPAMDILKSG TRKEELLVDA KDLQKTYLLR RILNPMGTTD AIEFLISKLK
QTKTNGEFFD SMNA
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