Gene Cpha266_2680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_2680 
Symbol 
ID4568859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand+ 
Start bp3074413 
End bp3075567 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content57% 
IMG OID639767247 
Product1-deoxy-D-xylulose 5-phosphate reductoisomerase 
Protein accessionYP_913088 
Protein GI119358444 
COG category[I] Lipid transport and metabolism 
COG ID[COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 
TIGRFAM ID[TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.193968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATCAC TATCCATCCT CGGCAGTACC GGTTCGATCG GGCTCAGCAC TCTCGATGTT 
GTTCGTCAGC ACCCTGAGCA GTTCACCATT ACCGGCCTTG CTGAAGGCCA TGATGTGGGA 
ATGCTTGTAA AACAGATCCG GGAGTTCAAC CCTCGCCTTG TTTCGGTACG AAATGCCGAT 
GCCGCAGCCG AACTTGCTTC GCTCCTCGGC AATGAGAAGC CGGAGATTTT TTACGGTATC 
GAGGGAGCCG CCACCGTCGC CGCGGCGGAT GGAGCTGATA TGGTCGTTTC CGCTATTGTG 
GGAGCTGCCG GACTTGTGCC GACCATCAGC GCCATCAAAG CCGGTAAAAA CATCGCGCTT 
GCCAACAAGG AGACCATGGT CGTAGCGGGC AGGCTTGTTA CCGATCTTGC CCGGCAGCAC 
AAGGTGACCA TCATTCCCGT CGACAGCGAA CATTCCGCTA TTTATCAGTC GCTTCTCGGC 
CATCGGCACG AGGATGTTCT GCGCCTTATT CTGACCGCAT CGGGAGGACC GTTCCTGAAC 
ACCTCTGCTG AAGAGCTTCG CGAGGTTACT CTCGAGCAGG CTCTGAAACA TCCGAAATGG 
ACGATGGGGG CAAAAATCAC GATCGATTCG GCGACGCTGA TGAACAAGGG GCTTGAGGTC 
ATCGAGGCTC ACTGGCTGTT CGACATGCCC GCACATAAAA TAGGCGTTGT GGTGCATCCG 
CAAAGCATCA TTCACTCCAT GGTGGAGTAT ATCGACGGTT GCGTCATGGC GCAGCTCGGC 
ATGCCGGACA TGAGGGCTCC CATCGCTTAC GCCATCGCCT ATCCGGAACG TTGCCCGAGC 
GGCATCGAGC GGCTTGATCT GCCGAAAATC GGTTCCCTGA GCTTCCAGGA ACCTGATCCG 
GGCAGATTCC CCTGTCTGCG ACTGGCCTAT GAATCGCTTG AGGCGGGAAG AACCTGTCCG 
GCCGTGCTGA ATGCCGCCAA TGAAATCGCC GTTGCCGCGT TTCTCGACAA ACGGATCGGG 
TTTACCGATA TTGCCGATAC CGTCGACAAG ACCATGCAGG CTCATGAGGC GTATACTCCG 
GTATCGCTCG AGGAGTACCT GGAGGCAGAC CGGTGGGCGC GAGAGATGGC AAAAGGTCTC 
GTTGAACGGG CATAA
 
Protein sequence
MRSLSILGST GSIGLSTLDV VRQHPEQFTI TGLAEGHDVG MLVKQIREFN PRLVSVRNAD 
AAAELASLLG NEKPEIFYGI EGAATVAAAD GADMVVSAIV GAAGLVPTIS AIKAGKNIAL 
ANKETMVVAG RLVTDLARQH KVTIIPVDSE HSAIYQSLLG HRHEDVLRLI LTASGGPFLN 
TSAEELREVT LEQALKHPKW TMGAKITIDS ATLMNKGLEV IEAHWLFDMP AHKIGVVVHP 
QSIIHSMVEY IDGCVMAQLG MPDMRAPIAY AIAYPERCPS GIERLDLPKI GSLSFQEPDP 
GRFPCLRLAY ESLEAGRTCP AVLNAANEIA VAAFLDKRIG FTDIADTVDK TMQAHEAYTP 
VSLEEYLEAD RWAREMAKGL VERA