Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_2551 |
Symbol | |
ID | 4569007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 2927652 |
End bp | 2928488 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639767116 |
Product | UspA domain-containing protein |
Protein accession | YP_912963 |
Protein GI | 119358319 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000359822 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TCCTTGTCCC GACGGACCTC TCAATTCAAG CATCATATGC TTTTGACGTC GCGCTCTCTA TTGCCCGTAA ATTCAGCGCA GCCGTTCACC TCTACCATGT CATCGAAGTA CCCGATTATC CGGAAATCAA CGCCATAACG GAACACTGGA AACTCGGATC AGCCAACGTC CTGGAAGCCA TCGAAACAAG ATTGCGCCAG ATAACCAAAA GCGAAGCCAC AGAAGGTCTC TCGGTTGACT GGTCTGTAGA TTTTGACACC CCATACGAAA AAATCGCCAA AAAAGCCGAT AACGAAGCGT TCGACCTTAT CGTCATCGGT TTCTGCGGCA GAAAAACACT CGAACGACTG ACCATCGGAT CAACGACAGA CAAGGTGATT ACCCATGCAT CATGCCCCGT TCTGACCATA AAAGAAAAAC TATCCTGTTT CTCGCCAACA AAAATCGTTT TCGCATCGAA TTTCGCCAGC AACATCTCCT GCTGCGCCTC TGCCGTCAGA GAGATGGCAG ACACCTACGG CGCCTCGCTC CATCTGTTGA GCATCAGCAC CAAAGCACAT TTCGAAAACA CCCGTCGTGC GACCATGCTG ATGAAAACCT TTGCCGCCGC AAACGCCATC GTCGACTATA CCGTCAACAG CTATAACGAC GAAAGCGAAG AAGAGGGAAT CCTGCATTTC GCCGAAGACA TCCAGGCCGA TCTCCTCTGC ATCCCCTTGC ACGCAAAAAC CGGCATATCC CGACTCTTCA GCGGAAACAT CGCAACGACC ATATCACAAC AGGCAACCCT GCCGGTCATG ACCTGCAAAG TCCCTGCCGC TCCCTGA
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Protein sequence | MKKILVPTDL SIQASYAFDV ALSIARKFSA AVHLYHVIEV PDYPEINAIT EHWKLGSANV LEAIETRLRQ ITKSEATEGL SVDWSVDFDT PYEKIAKKAD NEAFDLIVIG FCGRKTLERL TIGSTTDKVI THASCPVLTI KEKLSCFSPT KIVFASNFAS NISCCASAVR EMADTYGASL HLLSISTKAH FENTRRATML MKTFAAANAI VDYTVNSYND ESEEEGILHF AEDIQADLLC IPLHAKTGIS RLFSGNIATT ISQQATLPVM TCKVPAAP
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