Gene Cpha266_2417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_2417 
SymbolrpsC 
ID4569484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp2794594 
End bp2795346 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content46% 
IMG OID639766976 
Product30S ribosomal protein S3 
Protein accessionYP_912829 
Protein GI119358185 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0092] Ribosomal protein S3 
TIGRFAM ID[TIGR01009] ribosomal protein S3, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.14718e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGCCAGA AAGTTAATCC TAATGGATTC AGGCTTGGAA TTATCAGGGA CTGGACTTCG 
CGCTGGTACG ATGATAGTCC TGTAATTGCA GAAAAGATCA AGCAGGACCA TGTTATCCGA
AACTATGTTC AGGCAAGGCT GAAAAGGGAA AAAGCCGGAA TTGCACGTAT TGTTATCGAG
AGAACAACCA AGCATATCAA GATCAATATT TATGCAGCTC GTCCAGGTGC TGTGGTCGGC
AGAAAAGGCG AAGAGATCAA TAATCTCTCC CAGGAACTGA GCCGTATTAC CGGAAAAGAG
GTTAAGATTG ATGTTGTTGA AGTAATCAAG CCTGAGACTG AAGCTCAGTT AATTGGCGAA
AATATCGCAT ACCAGCTCGA AAATCGTGTT TCTTTCAGAC GTGCGATGAA ACAGGCAATT
CAGCAGGCGA TGCGTGCCGG AGCGGAAGGT ATCAGAATCC GTTGTGCAGG TCGTCTTGGA
GGAGCAGAGA TTGCCAGGGC TGAACAGTAT AAGGAAGGAA AGATTCCTCT TCATACCATT
CGTGCCAATG TTGATTATGC AAGCGTAACC GCTCATACTA TCGCCGGAAC AATAGGCATC
AAGGTTTGGG TATACAAAGG CGAAGTTCTT GTTCAGCGTA TTGACGCTAT TGAAGAGGAT
GAGTTAAAGA GAATCAATGA GAGGCGCGGA GATTCGAAAT CCAGACCGCG TGATCCTCGT
AACAAGCGTC GTCGTCGTAC AAAACGATCA TAG
 
Protein sequence
MGQKVNPNGF RLGIIRDWTS RWYDDSPVIA EKIKQDHVIR NYVQARLKRE KAGIARIVIE 
RTTKHIKINI YAARPGAVVG RKGEEINNLS QELSRITGKE VKIDVVEVIK PETEAQLIGE
NIAYQLENRV SFRRAMKQAI QQAMRAGAEG IRIRCAGRLG GAEIARAEQY KEGKIPLHTI
RANVDYASVT AHTIAGTIGI KVWVYKGEVL VQRIDAIEED ELKRINERRG DSKSRPRDPR
NKRRRRTKRS