Gene Cpha266_2406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_2406 
SymbolrpsE 
ID4569472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp2789884 
End bp2790402 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content45% 
IMG OID639766964 
Product30S ribosomal protein S5 
Protein accessionYP_912818 
Protein GI119358174 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0326698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAAA CATCTGCACG GAGTATCAAA CCCGGCGAAC TGAATCTTAA GGAAAAACTT 
GTTCATATCA ACAGGACAGC AAAAGTTGTA AAAGGCGGAA AACGCTTTGG ATTCAATGCT
ATTATTGTTG TAGGAGATAA GGAAGGCCAT GTAGGATACG GACTTGGAAA AGCAAATGAA
GTACAGGACG CTATCGCGAA GGGTGTTGAG GACGGAAAGA AAAATGTCAT CAAGGTTCCA
ATTGTAAAAG GCACGATTCC TCACCAGATT ATTGCAAAAT ATGGTTCAGC GAAGGTGTTG
ATGAAGCCCG CAACTCCCGG TACAGGTTTA ATTGCCGGTG GTGCAGTGAG AGCGGTTCTT
GAAATGGCAG GGATTCATGA TGTTCTTACC AAGTCGCTTG GCTCATCAAA TCCCCACAAC
GTCGTTAAAG CCGCAATAAA AGGTCTGCAG AGCATGTCAG ATGCATATGA GGTTGGAGAA
CGACGCTCGA AGAGCCTGAA AGAGGTTTTT GAAAGCTAA
 
Protein sequence
MAKTSARSIK PGELNLKEKL VHINRTAKVV KGGKRFGFNA IIVVGDKEGH VGYGLGKANE 
VQDAIAKGVE DGKKNVIKVP IVKGTIPHQI IAKYGSAKVL MKPATPGTGL IAGGAVRAVL
EMAGIHDVLT KSLGSSNPHN VVKAAIKGLQ SMSDAYEVGE RRSKSLKEVF ES