Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_2406 |
Symbol | rpsE |
ID | 4569472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 2789884 |
End bp | 2790402 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639766964 |
Product | 30S ribosomal protein S5 |
Protein accession | YP_912818 |
Protein GI | 119358174 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0326698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAAA CATCTGCACG GAGTATCAAA CCCGGCGAAC TGAATCTTAA GGAAAAACTT GTTCATATCA ACAGGACAGC AAAAGTTGTA AAAGGCGGAA AACGCTTTGG ATTCAATGCT ATTATTGTTG TAGGAGATAA GGAAGGCCAT GTAGGATACG GACTTGGAAA AGCAAATGAA GTACAGGACG CTATCGCGAA GGGTGTTGAG GACGGAAAGA AAAATGTCAT CAAGGTTCCA ATTGTAAAAG GCACGATTCC TCACCAGATT ATTGCAAAAT ATGGTTCAGC GAAGGTGTTG ATGAAGCCCG CAACTCCCGG TACAGGTTTA ATTGCCGGTG GTGCAGTGAG AGCGGTTCTT GAAATGGCAG GGATTCATGA TGTTCTTACC AAGTCGCTTG GCTCATCAAA TCCCCACAAC GTCGTTAAAG CCGCAATAAA AGGTCTGCAG AGCATGTCAG ATGCATATGA GGTTGGAGAA CGACGCTCGA AGAGCCTGAA AGAGGTTTTT GAAAGCTAA
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Protein sequence | MAKTSARSIK PGELNLKEKL VHINRTAKVV KGGKRFGFNA IIVVGDKEGH VGYGLGKANE VQDAIAKGVE DGKKNVIKVP IVKGTIPHQI IAKYGSAKVL MKPATPGTGL IAGGAVRAVL EMAGIHDVLT KSLGSSNPHN VVKAAIKGLQ SMSDAYEVGE RRSKSLKEVF ES
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