| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_2089 |
|---|
| Symbol | |
|---|
| ID | 4570437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | + |
|---|
| Start bp | 2421959 |
|---|
| End bp | 2423722 |
|---|
| Gene Length | 1764 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639766671 |
|---|
| Product | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase |
|---|
| Protein accession | YP_912525 |
|---|
| Protein GI | 119357881 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
|---|
| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAATC GTGAAATAAC ATCACTGTGG AGCCGACTCA TTGTCGAAGA ACTCATCCGG
CAGGGCTGCG GATTCTTCTG TCTCTCTCCC GGCTCCCGTT CTACCCCGCT TACGGTGGCC
GTGGCACGAA ATCCGATGGC AAAATGGAAA ACATTTCCCG ATGAACGTTC TGCGGGGTTT
TTCGCACTTG GCCACGCCAG GGCAACCGGT AAACCGGCAA TCCTCATCTG TACCTCCGGT
ACCGCCGTGG CAAACTATTT TCCGTCAGTG GTAGAGGCCT CGATGGACTG CCAGCCCATG
ATTATTCTTT CGGCTGACAG ACCTTTTGAA CTGCTCGAAA CAGGCGCCAA TCAAACGATA
CGCCAGTCGG GCATGTTCGG CTCATACAGC CGATGGAACT TCCGGTTACC TGAACCCTCT
GCGGAGATTC CTCTTCAGTC GGTACTCTCG GCCATCGATC ATGCCGTCGA AAAAGCAACG
GGAAATCCGC CCGGCCCGGT TCATCTTAAT GTGCCCTTCA GGGAGCCGTT CGAACCTGAA
CTTTCCGATC TTAAAGACCC CTGGCTTGCG CCTGTAGCTC ACTGGATCGA CTCTGCGGAA
CCTCTTCGCC GCTGCAGTCA TGCCGAGAAC GTTCCTCATC CTGCCGTTAT CGAAAAGACA
GCGGAACTCA TCAAGGCATC CCGCCAGCCG CTCTTTATTG CGGGAAAACT TGATTCCCGG
GAAGACGCGA TTGCCGTCGG GCTCCTTGCC GGTTCGCTCG GTATTCCGCT CTATGCGGAT
CTGTCGTCCG GGCTGCGTTA CAGCACTCAC TGCAAACCGT GGCAGCTTGC CTTTCAGTCG
CCGGCGTTTC TTGAACACTA CCGGCCTGAT ATGGTGGTTC ATTTCGGCGG ACAGTTGATA
TCCCGACACC CTGGCGCCGC CATCCGGGTC AGCCATCCCG GAAACTATCT TGTTGTGAAA
CCCTCTGCCA ACCGTTACGC ACCCGACCAC AACGTGACGC TGAGCATCGA AGCGTCACCG
AAACTCTTTG CTGACGCGCT CCTGCGTGAC CTGCAGAACG TGAGTTTGCC TGCATGGAAG
GGGCCTGTTG CTGATGAGTT TTTCACCTTC TCAGAGGAGG AAATTGAGCA CTACTGCGAG
GACGACAGGC CTGTTTCCGA GATTTCAGTC GCGCGGATTG TCTCTCGGCT TACGGGGGAG
CATGATGGCC TTTTTATGTC CAACAGCATG CCGGTGAGGG ATATGGATCT CTTCGCTGCC
GCCACACGCC AGACCCCGAC GATCTCCATT GCCATGAACA GAGGCGCAAG CGGTATTGAC
GGCATTCTTT CAACAGCGGC TGGTTTTGCC GAAGGACTTC AGAAACCGGT AACCCTTGTC
ATCGGCGATA TTGCGTTTCT TCATGACCTC AACGCGCTCT CCCTGCTTGA AAGCAGCTCT
GTTCCTCTGC GGATTATAGT CGTGAACAAT AACGGCGGCG GCATTTTTTC GTTTTTACCC
ATTGCTGCAG AGAAGGATGT TTTTGAGACG CATTTTGCCA CGCCGCAACA TTACAGCATA
GCCTCCGCTG CCGCAACCTT CGGGGTTGCC CATGCCTCGC CGAAAACAAA CCGGGAGTTT
GCCGACACCT GTACAGAGGC ATTTGAAAGC AATGAGAGTA TCGTTATAGA GATTACGGGA
AGCCGTGAGG ATAATGTCAG CGCACACCGC TCTTTGCAGC ATACTATCAA TATGCTGGCC
CGAAAATTTC TGAAAAAACA GTAA
|
|---|
| Protein sequence | MNNREITSLW SRLIVEELIR QGCGFFCLSP GSRSTPLTVA VARNPMAKWK TFPDERSAGF
FALGHARATG KPAILICTSG TAVANYFPSV VEASMDCQPM IILSADRPFE LLETGANQTI
RQSGMFGSYS RWNFRLPEPS AEIPLQSVLS AIDHAVEKAT GNPPGPVHLN VPFREPFEPE
LSDLKDPWLA PVAHWIDSAE PLRRCSHAEN VPHPAVIEKT AELIKASRQP LFIAGKLDSR
EDAIAVGLLA GSLGIPLYAD LSSGLRYSTH CKPWQLAFQS PAFLEHYRPD MVVHFGGQLI
SRHPGAAIRV SHPGNYLVVK PSANRYAPDH NVTLSIEASP KLFADALLRD LQNVSLPAWK
GPVADEFFTF SEEEIEHYCE DDRPVSEISV ARIVSRLTGE HDGLFMSNSM PVRDMDLFAA
ATRQTPTISI AMNRGASGID GILSTAAGFA EGLQKPVTLV IGDIAFLHDL NALSLLESSS
VPLRIIVVNN NGGGIFSFLP IAAEKDVFET HFATPQHYSI ASAAATFGVA HASPKTNREF
ADTCTEAFES NESIVIEITG SREDNVSAHR SLQHTINMLA RKFLKKQ
|
|---|
| |