Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_2000 |
Symbol | |
ID | 4570828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 2314410 |
End bp | 2315234 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639766582 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_912437 |
Protein GI | 119357793 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000578748 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGAAAGC TCGATAACAA GGTTTCTGTT ATTACCGGAT CAACGCGTGG TATCGGAAAG GCTATAGCCC AGGCATTTGT CTCGGAAGGA TCGAAAGTAG TCATTACCTC CTCTTCGCAA GCGAATGTCG ACGCAACTGT ATCGGAATTT CCACCAGGCT CGGTGTATGG ACATGTTTGT GATGTTGCCT CTTTTCGGGA AATGGAGCGG CTTGTCGATG CCTCGGTTGG CAAATTTGGC CGGATTGACT GTTTTATCAA TAATGCGGGC ATTTCGGAGC CGTTCTGTAA TATTACCGGT GGCGATCCGG ATATCTGGGG GAGGGTTATT GATACCAATC TCAAAGGTAC CTACTACGGT TGCCGGGCAG CCATCGGTTA TTTCCAGAGA GAAGATATTC CGGGCAAGAT TATCACGATG GCGGGTTCAG GAACCGATAA GGGATCGAAT ACCCCGTATA TCAGTGCATA TGGATCCACC AAGGCTGCTA TTGCCCGATT TACCTCGGCG ATTGCTGAAG AGTATCGGCA TACCGGTATT TCGATCATGC TGCTTCATCC CGGTCTCGTT CGGACGGGCA TGGTCAGTGC AGAACAGCCT ACCCCTGAAC TGCTTCGGCA GCTTTCCGTT TTCAACACTA TTCTCGATAT TTTTGCGCAG CCTCCATCGG TAGCCGCCGA TCTTGCCGTA AAAATGGCTT CCGGCTGGAG CGACGGAAAA ACAGCTCTTT ATCTTTCTGC TCTTACCGGC TGGAGAAAAA AAAGGTTGTT GCTGACCTAT CCCTTCCGTA AACTGTTCAA CAGTATCGAT CGTCGAACCT ACTAA
|
Protein sequence | MGKLDNKVSV ITGSTRGIGK AIAQAFVSEG SKVVITSSSQ ANVDATVSEF PPGSVYGHVC DVASFREMER LVDASVGKFG RIDCFINNAG ISEPFCNITG GDPDIWGRVI DTNLKGTYYG CRAAIGYFQR EDIPGKIITM AGSGTDKGSN TPYISAYGST KAAIARFTSA IAEEYRHTGI SIMLLHPGLV RTGMVSAEQP TPELLRQLSV FNTILDIFAQ PPSVAADLAV KMASGWSDGK TALYLSALTG WRKKRLLLTY PFRKLFNSID RRTY
|
| |