Gene Cpha266_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_2000 
Symbol 
ID4570828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp2314410 
End bp2315234 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content49% 
IMG OID639766582 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_912437 
Protein GI119357793 
COG category[R] General function prediction only
[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.78748e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAGC TCGATAACAA GGTTTCTGTT ATTACCGGAT CAACGCGTGG TATCGGAAAG 
GCTATAGCCC AGGCATTTGT CTCGGAAGGA TCGAAAGTAG TCATTACCTC CTCTTCGCAA
GCGAATGTCG ACGCAACTGT ATCGGAATTT CCACCAGGCT CGGTGTATGG ACATGTTTGT
GATGTTGCCT CTTTTCGGGA AATGGAGCGG CTTGTCGATG CCTCGGTTGG CAAATTTGGC
CGGATTGACT GTTTTATCAA TAATGCGGGC ATTTCGGAGC CGTTCTGTAA TATTACCGGT
GGCGATCCGG ATATCTGGGG GAGGGTTATT GATACCAATC TCAAAGGTAC CTACTACGGT
TGCCGGGCAG CCATCGGTTA TTTCCAGAGA GAAGATATTC CGGGCAAGAT TATCACGATG
GCGGGTTCAG GAACCGATAA GGGATCGAAT ACCCCGTATA TCAGTGCATA TGGATCCACC
AAGGCTGCTA TTGCCCGATT TACCTCGGCG ATTGCTGAAG AGTATCGGCA TACCGGTATT
TCGATCATGC TGCTTCATCC CGGTCTCGTT CGGACGGGCA TGGTCAGTGC AGAACAGCCT
ACCCCTGAAC TGCTTCGGCA GCTTTCCGTT TTCAACACTA TTCTCGATAT TTTTGCGCAG
CCTCCATCGG TAGCCGCCGA TCTTGCCGTA AAAATGGCTT CCGGCTGGAG CGACGGAAAA
ACAGCTCTTT ATCTTTCTGC TCTTACCGGC TGGAGAAAAA AAAGGTTGTT GCTGACCTAT
CCCTTCCGTA AACTGTTCAA CAGTATCGAT CGTCGAACCT ACTAA
 
Protein sequence
MGKLDNKVSV ITGSTRGIGK AIAQAFVSEG SKVVITSSSQ ANVDATVSEF PPGSVYGHVC 
DVASFREMER LVDASVGKFG RIDCFINNAG ISEPFCNITG GDPDIWGRVI DTNLKGTYYG
CRAAIGYFQR EDIPGKIITM AGSGTDKGSN TPYISAYGST KAAIARFTSA IAEEYRHTGI
SIMLLHPGLV RTGMVSAEQP TPELLRQLSV FNTILDIFAQ PPSVAADLAV KMASGWSDGK
TALYLSALTG WRKKRLLLTY PFRKLFNSID RRTY