Gene Cpha266_1997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1997 
Symbol 
ID4570825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand- 
Start bp2312127 
End bp2312708 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content48% 
IMG OID639766579 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_912434 
Protein GI119357790 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00253668 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTCA TTGTAACAGC TATTCCGGAT GTCCTGATTT TTGAGCCGGT CGTGTTTGGC 
GACGAACGGG GTTATTTTCT TGAAACGTTT CGTTCTGACC TGATTGAAAA GCATATAGGG 
AGGGTCGATT TTGTTCAGGA TAACGAGTCG AAATCAGGAT ACGGTGTTCT GCGCGGCCTC 
CATTTCCAGA AACCGCCATT TACTCAATCG AAGCTGGTGA GGGTCGTTAA AGGCAGGGTG 
CTTGATGTTG CCGTTGATTT GCGCAGAGGC TCTCCATGGT ATGGCAAAAG CGTGACATGC 
CTGCTCGATG ACAAACGGCG GAGCATGCTG TGGATACCTA AAGGATTTGC TCACGGGTTT 
GTCGTTCTTT CCGATGAAGC TGTTTTTGTG TATAAGTGTG ATGCCTATTA TGCGCCCGAG 
TATGATGGGG GAGTCCGCTG GAATGACGAG ACGCTTGGTA TAGACTGGCA GCTTTCATCG 
AGCGATATCA GGGTTTCGGG CAAAGATGCG CTGTTACCCG CGTTCGGTGA TGTCGACTGT 
TTTGCATACG AAGCGTTTAC TTGTGAGAAT ATTTACCGTT AA
 
Protein sequence
MNVIVTAIPD VLIFEPVVFG DERGYFLETF RSDLIEKHIG RVDFVQDNES KSGYGVLRGL 
HFQKPPFTQS KLVRVVKGRV LDVAVDLRRG SPWYGKSVTC LLDDKRRSML WIPKGFAHGF 
VVLSDEAVFV YKCDAYYAPE YDGGVRWNDE TLGIDWQLSS SDIRVSGKDA LLPAFGDVDC 
FAYEAFTCEN IYR