Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1981 |
Symbol | |
ID | 4570421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 2295039 |
End bp | 2295893 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639766562 |
Product | endonuclease IV |
Protein accession | YP_912418 |
Protein GI | 119357774 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGTG TCGGAGCACA TGTCAGTATT GCGGGAGGCA TCGAAAATGC TCCGCTGAAC GCCAGCAGCA TTGGCGCAAC AGCATTCGCA TGCTTTACAA AAAATCAGCG GCAGTGGAAA TCTCCTGAAA TCTCCCCGGC GTCAATAGAG CTATTCGAAA AAAACTGCGC TACTGCCGGG ATCAGGTCTG AACACATCCT CCCGCACGAC AGCTACCTCA TCAACCTCGG CAACCCCGAT CCCGACAAAC TGGAGCGATC AAGAAATGCG TTTATTGATG AAATTCGTCG GGCGGCAAGT CTCGGCCTCG TCATGCTGAA CTTCCATCCG GGAAGCCACC TCAATCAGAT TGATGAAAAG GGCTGTTTGC AGCTTATTGC CGATTCTGTT AACATCGCTC TCGAAAAAAC CTCCGGCGTC ACAGCCGTCA TCGAAAACAC CGCCGGACAG GGAAGCAACC TCGGCAACAG CTTTGAACAA CTTGCCTCGA TCATTGATAA AATCGACGAT AAATCCAGAG TCGGGGTTTG TCTTGACACC TGCCATCTTT TTGCGAGCGG CTACGACCTG CAATCAAGCG AAGCCGTAAC GGCAATGTTC GAAGCATTTG ACCGGACTGT CGGGCTCTCC AACCTGAGAG GAATGCACCT CAACGATGCG AAACACCCGC TCGGAAGCCA TCTTGACCGA CATGCCTGTA TCGGAAAAGG AGCGATCGGG CTCAGCGCCT TCGCATCTAT CATGAACAGC CCATTCTGCG AGGAGATCCC CCTCATCCTT GAAACACCGG ATGCGGAGGG TTGGAAAGAG GAGATAGTTC TTCTCTATTC ACTCATAGAC CATCCGATCA AATAG
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Protein sequence | MKRVGAHVSI AGGIENAPLN ASSIGATAFA CFTKNQRQWK SPEISPASIE LFEKNCATAG IRSEHILPHD SYLINLGNPD PDKLERSRNA FIDEIRRAAS LGLVMLNFHP GSHLNQIDEK GCLQLIADSV NIALEKTSGV TAVIENTAGQ GSNLGNSFEQ LASIIDKIDD KSRVGVCLDT CHLFASGYDL QSSEAVTAMF EAFDRTVGLS NLRGMHLNDA KHPLGSHLDR HACIGKGAIG LSAFASIMNS PFCEEIPLIL ETPDAEGWKE EIVLLYSLID HPIK
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