| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1896 |
|---|
| Symbol | |
|---|
| ID | 4570855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 2202604 |
|---|
| End bp | 2205222 |
|---|
| Gene Length | 2619 bp |
|---|
| Protein Length | 872 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639766478 |
|---|
| Product | DNA mismatch repair protein MutS |
|---|
| Protein accession | YP_912336 |
|---|
| Protein GI | 119357692 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
|---|
| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0824451 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGTC CCCCGAGAGA ACACTCTCCG ATGATGCGTC AGTATCTCGA TGTCAAGGAG
CGGTATCCCG ATTACCTGCT GCTCTTCAGG GTGGGCGATT TTTACGAAAC CTTTTTCGAT
GACGCAAAAG AGGTTTCCTC AGCACTGAAC ATCGTGCTCA CAAGGCGTTC GAACGGCTCA
TCTTCAGAGG TTCCCATGGC GGGGTTTCCG CACCATGCAA GCGAAGGCTA TATTGCCAGG
CTGGTTAAAA AAGGGTACAA GGTAGCCGTT TGCGATCAGG TTGAAGATCC TTCTGAGGCA
AAAGGGATCG TCAGGCGTGA AATCACCGAT ATTGTAACGC CGGGAATTAC CTACAGCGAC
AAAATTCTCG ATGACCGGCA CAACAACTAT CTCTGTGCGC TTGCCCTGCT TAAAGAGGGG
CGGCGGGTCG TTGCCGGTGC GGCATTTATC GACGTTACCA CCGCCGAGTT CAAAATTGCA
GAGCTCCTGC CTGAAGAGGT TGCTGATTTT GTCCGTTCGC TTCATCCCGC CGAACTGCTG
ATTGCAAGAA AGGAGAAAGA GCGGTTTGAG CCTGTCCGAA AGGAATTTCC GCCCGATATG
GTTGTTACCG AGCTCGATGA CTGGATGTTT GGCGAAGACC AGGCATCGGC AGTGCTTGCC
AGGCAGTTCA AAACCCATTC GCTCAAAGGT TTCGGCATTC ATGGCAACAG TGCCGGAAAA
GTAGCCGCGG GAGTCATTCT TCAGTACCTC GAAGAGACCC GTCAAAACCG TCTGCACTAC
ATTACCCGTA TCGGTACGCT GCAGAACACC GATTATATGA CGCTCGATCT GCAGACCCGG
CGAAACCTCG AAATCATCTC CTCCATGCAG GATGGCACGA TCAACGGCAG TCTGCTTCAG
GTGATCGATC GTACCGCCAA TCCCATGGGC GCACGCCTGA TTCGTCGCTG GCTGCAAAGC
CCGCTCAAGC GGCTTGAGGA TATCGCTTTG CGTCTTGACG CCGTTGAGGA GTTTAAGGAT
TTTTCGCCAT TGCGTCGCGA GGTACACGGT CATCTTTCTG AGATCAATGA TCTCGAACGG
GTGCTGTCGC GCATCGCCAC ATTCCGGTCT ATTCCCAGAG AGATGCGTCA GTTCGGCAGT
GCGTTATCGA AGATTCCGCT GTTGAAGGAG GCTCTGCTGC AAACCACAAC GGCAAGGCTT
CAGGCCCTCG GCAGGTCGCT GGTGGAGATG CCCGAGCTTG TCGCACTGAT TGAAAAAGCT
GTCGATCCGG AGGCCGGAGC CTCAATGCGC GACGGCGGCT ACATCCGGGC AGGGTACCAT
CAGGAGCTTG ACGAGCTGCG CACCATTGCC TCGACAGCCA AGGATCGGCT GCTCGAAATT
CAGCAGGAAG AGCGTGCCCG AACGTCGATT TCATCCCTCA AGGTTCAGTT CAACAAGGTT
TTCGGCTACT ATATCGAAAT CAGCAAAAGC AATCTCGACA AGGTGCCCGA CTACTATGAA
AAAAAGCAGA CACTTGTCAA TGCCGAACGT TTCACGATTC CGGCATTGAA AGAGTATGAA
GCGAAAATTC TCAATGCCGA AGAGAAGAGC ATTGTTCTTG AGCAGCGGCT GTTTCATGAT
CTCAGCCTTC TTATTGCGGA GCAGGCAGCT CTTGTTCAGA CTAACGCCGC GGTTATCGCC
GAGATTGACT GCCTCGCATC CTTTGCCGCC GTTGCCGAAG AGTACGGCTA CTGCAAGCCC
GAGGTTGCCG GGCATGACCG GCTGCTTGTT ACCGGCGGAC GTCACCCTGT TCTTGAACGG
ATGATGAGCA CGGACGACCC CTATGTTTCA AACGATCTGC TTTTTGACCG GAAGCAGAGA
TTACTGATCA TTACCGGACC GAACATGGCT GGTAAAAGTT CCTATCTGCG TCAGGCAGGG
CTGATTGTGC TGCTTGCCCA GGCAGGCTCT TTTGTTCCGG CGCAAAAGGC TGAAATCGGC
CTTGTCGACC GTATTTTCAC CAGGGTTGGC GCTTCGGACA ACCTTGCTTC GGGAGAGAGC
ACCTTTCTGG TGGAGATGAA CGAGGCAGCC AGCATTCTTA ACAACGCCAC ATCGAAAAGC
CTTCTCCTGC TCGATGAAAT AGGGAGGGGA ACCAGCACCA GCGACGGCAT GTCGATTGCC
TGGTCGATGA GCGAATTCAT CCACGACAGC ATCGGGGCGC GAACGCTCTT TGCCACGCAC
TACCATGAGC TCGCCGAGCT TGAAACGCGC CTTCAGGGTG TTGTCAACTA CAACGCCACC
GTGATTGAGA CGGCTGAAAA GGTTATCTTT CTGCGCAAAA TTGTCAGAGG CGCTTCCGAT
AACAGCTACG GCATCGAAGT TGCCAGAATG GCCGGCATGC CTCAGGAGGT CATCGTGCGG
GCAAAGGAGA TTCTGGCGGG AATGGAAAAA CGGGAGATCG ACGTATCAGG AATAAAGCAA
CCATCGATAG AAAGCATGCA GATAAGCCTG TTTGAAGAGG CCGATTCGCG GCTTCGAACC
GCGATTGAAA ATCTCGACCT TGACCGGCTG ACTCCGCTCG ACGCCCTGAT TGAACTGAAA
AAGTTGCAGG ATCTGGCACT CAAAGGATGC GGACGCTGA
|
|---|
| Protein sequence | MSSPPREHSP MMRQYLDVKE RYPDYLLLFR VGDFYETFFD DAKEVSSALN IVLTRRSNGS
SSEVPMAGFP HHASEGYIAR LVKKGYKVAV CDQVEDPSEA KGIVRREITD IVTPGITYSD
KILDDRHNNY LCALALLKEG RRVVAGAAFI DVTTAEFKIA ELLPEEVADF VRSLHPAELL
IARKEKERFE PVRKEFPPDM VVTELDDWMF GEDQASAVLA RQFKTHSLKG FGIHGNSAGK
VAAGVILQYL EETRQNRLHY ITRIGTLQNT DYMTLDLQTR RNLEIISSMQ DGTINGSLLQ
VIDRTANPMG ARLIRRWLQS PLKRLEDIAL RLDAVEEFKD FSPLRREVHG HLSEINDLER
VLSRIATFRS IPREMRQFGS ALSKIPLLKE ALLQTTTARL QALGRSLVEM PELVALIEKA
VDPEAGASMR DGGYIRAGYH QELDELRTIA STAKDRLLEI QQEERARTSI SSLKVQFNKV
FGYYIEISKS NLDKVPDYYE KKQTLVNAER FTIPALKEYE AKILNAEEKS IVLEQRLFHD
LSLLIAEQAA LVQTNAAVIA EIDCLASFAA VAEEYGYCKP EVAGHDRLLV TGGRHPVLER
MMSTDDPYVS NDLLFDRKQR LLIITGPNMA GKSSYLRQAG LIVLLAQAGS FVPAQKAEIG
LVDRIFTRVG ASDNLASGES TFLVEMNEAA SILNNATSKS LLLLDEIGRG TSTSDGMSIA
WSMSEFIHDS IGARTLFATH YHELAELETR LQGVVNYNAT VIETAEKVIF LRKIVRGASD
NSYGIEVARM AGMPQEVIVR AKEILAGMEK REIDVSGIKQ PSIESMQISL FEEADSRLRT
AIENLDLDRL TPLDALIELK KLQDLALKGC GR
|
|---|
| |