| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1849 |
|---|
| Symbol | |
|---|
| ID | 4571191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 2142687 |
|---|
| End bp | 2144033 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639766431 |
|---|
| Product | PUCC protein |
|---|
| Protein accession | YP_912289 |
|---|
| Protein GI | 119357645 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAC TTAACCTGAT CCGCCTCTCC CTTTTCCAGA TGGGTTTTGG AATCATGCTC
GGTTTTCTGC ATGATACCCT GAACCGGGTC ATGACTACGG ATCTTGGCAT CTCCTCAACC
ATTGTGTTTG GCCTCATCAG CCTGAAGGAG CTGCTTGCGA TATTCGGCGT CAAGGTCTGG
GCTGGCAACA TGTCCGATCG CGCGAATCTT TTCGGTCTGA AACGCACACC CTATATTCTG
CTTGGGCTTT TTTTCTGTGT TTTTTCCTTT ATGCTCTCTC CTGCGGCAGC CTATGAGGTA
ACTGTCGCCG GAAAAAGTTT TTCTGAACTT TTTCCGGCCA TATTTACCGA TATCGGTCTG
TTGAAGCTTG CGGTCATTTT TCTTCTGTTT GGTTTTGGAT TGCAGGTTGC CACAACAGCC
TACTATGCGC TTCTTGCCGA TACGGTTGGT GAAGAGAACA TTGGCAAGGT TACCGGTGCA
AGCTGGACTC TCATGGTTCT TACTACCATT ATTGCTACAA GGGTTGTCGG CTCGTTTCTC
GATGTCTATA CCCCCGAAAG GCTTATTACT GTTGCTGAAG TTGGTGGATC GATAGCGCTC
TGTATCGGGC TTTTTGCCGT ACTCGGTATT GAAAAGCGAA ATGTAGTTCC TTCAGAGGGC
AAGAGCAGGC ACTCCATCTC TTTTTCACAG TCACTGAAAC TGCTCTCTTC ATCACCGAAA
ACCCTGCTGT TTGCTTTTTA TATCTTTATC TCGATTTTTG CGCTCTTTGC CAATGAAATT
GTCATGGACC CTTTTGGAGG CGATGTATTC GGCATGCCGG TCGGTACAAC TACCAAGCTG
TTCCGGCCGA CAATGGGTGG TACGCAGTTG ATTTTCATGC TGATCGTGGG ATTTCTGCTC
AACAGGATCG GTCAGAAGCG AGGCGCGCAT ATCGGCAATT TTTTTGGTAT TATCGGCTTC
AGCATGCTGA TTGCCGCCGG CTTCATGCGC GATGAACAGT TCCTTCGCAT TGCGCTTGTC
GTAACCGGCA TAGGGCTTGG AGCGGCCAGC GTATCCAATA TCTCCATGAT GATGACCATG
ACGGCAGGTC GCAGCGGTAT CTATATAGGC CTCTGGGGTA CAGCGCAAAG CCTCGCTATT
TTTATCGGGC ATTTCGGAGC GGGTATTATT CGTGACGTGG TTTATCACCT TTCCGGAGCT
TATGTCTGGG CTTATGCCGC TATATTTTTA ATGGAAATTA TTGCCTTTAC GATATCGAGC
CTTGTTCTGC CCCATATTTC GAAAGAGGCG TTCGAAGCCG AAAGCAAAGC GAAAATCGCT
GAACTGCAAC CAGCAGAAGG GGGTTGA
|
|---|
| Protein sequence | MKQLNLIRLS LFQMGFGIML GFLHDTLNRV MTTDLGISST IVFGLISLKE LLAIFGVKVW
AGNMSDRANL FGLKRTPYIL LGLFFCVFSF MLSPAAAYEV TVAGKSFSEL FPAIFTDIGL
LKLAVIFLLF GFGLQVATTA YYALLADTVG EENIGKVTGA SWTLMVLTTI IATRVVGSFL
DVYTPERLIT VAEVGGSIAL CIGLFAVLGI EKRNVVPSEG KSRHSISFSQ SLKLLSSSPK
TLLFAFYIFI SIFALFANEI VMDPFGGDVF GMPVGTTTKL FRPTMGGTQL IFMLIVGFLL
NRIGQKRGAH IGNFFGIIGF SMLIAAGFMR DEQFLRIALV VTGIGLGAAS VSNISMMMTM
TAGRSGIYIG LWGTAQSLAI FIGHFGAGII RDVVYHLSGA YVWAYAAIFL MEIIAFTISS
LVLPHISKEA FEAESKAKIA ELQPAEGG
|
|---|
| |