Gene Cpha266_1845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1845 
Symbol 
ID4571187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp2124518 
End bp2125933 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content51% 
IMG OID639766427 
ProductTolC family type I secretion outer membrane protein 
Protein accessionYP_912285 
Protein GI119357641 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01844] type I secretion outer membrane protein, TolC family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.90204e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAATA CAACCAAAAA AAACCTGAAA ACCCTTGCAG CGGCAGTTTT GCTGCTCTGC 
CTCGGGGCAC CTGAAACGGC GAAGGCCGGG CCGGTAACCG TGCGAGAGGC GGTTGAAAAA
GCGCTGAACA CCAACCCTGA AATAAAAGCA AGGTTTCATG CTTTTCGGGA CGTGTATGAA
GAGCAGGGCG TTGCAAACGG CGGGTACTGG CCGCGAATTG ACGCTACGGC AGGCATAGGC
AGGGAGTGGC TTCGTGGTGA AAATGTTACC GACAAGGACT ACTGGCGCAA GGGCGTTCGT
CTGGAGCTTT CCCAGATGCT GTTTGACGGA TTTTATACCT GCAATCAGGT TTGCCGGTTA
AAACACTCGG GTCAGGCACG CTATTTTGAG TTCATGGATA CCATGGAGAG CGTTGGTCTT
GAGAGTTACC GCTCTTATGC CGATGTGTTG CGGTATCGGG AGATGGTTCG TCTTGCCAAG
AGGAACTATG ATTACCATCA GGAGATTTTC AATCAGGTCA GCAGTCGCGT TCGTGCCGGT
GTAGGGGCCG GGGTTGACGT GAGCCAGATT AGCGCCCGTG TTGCTCTTGC CCAGTCGAAC
TATTTGACTG AGTTAAGCAA TCTGCACGAT GTGACGGCAC GTTTTCAGCG GATTATTGGC
GAATTGCCTG AGGAAAATAT GCAGGCAGCG CTGCTCCCTA CTGACGGCAT ACCGGCAACA
GCCTCTGATG CTCTTAAAGA TGCGTATCAG CATAACCCGG GATTTCTTGC CACGATGTCT
GACATCAATG CAGCAAAACA TGCGGTGAAG GTGCAGGAGT CCAAATTCTA TCCAAGACTC
GATTTCAAGG CTCGCCATGA CTGGTCGTGG GATCTTGATG GTATTGACGG AAGGCAGGAT
GAGAGCGTGG TTGAACTTGT CATGACCTAC AATATTCTTA ACGGTGGTTC TGATGCTGCC
GCTGTTCGTC AGTATCGCGA AAAAATGTAC CGTTCGGTTG ACATGAAAGA CAAGGCAGCT
ACCGATCTGC GCCAGACCAT GACCATTGCT TATAACGACA GGCAGATTAT CGGTCAGCAG
GTTCGTTATC TCGATGCCCA TCGTAAAAAC CTGGATCAGG TTCGCGTTGC TTATCGTGAA
CAGTTCAACA TAGGCAAACG AACCCTGCTT GATCTGCTCG ATACCGAAAA CGAGTACTAT
CAGGCACAGC GGGCTTACTA TAACGGCTTT TTTGATTTGA CGATAGCCAA TGCGAGAGCG
CTCGCCGGCA TGGGCAAATT GCTGACCACC ATGAATGTCG TTCGTGGTGA GTTGCCGAGT
CTCAAGGATA TCAATATTCC TCTGCCAAGA GTAACCGATG AGGATGTTCC GCCGGTTGAA
ATTCCCGTTC CGGTGACCAT GGCGAAGAAG TTTTGA
 
Protein sequence
MKNTTKKNLK TLAAAVLLLC LGAPETAKAG PVTVREAVEK ALNTNPEIKA RFHAFRDVYE 
EQGVANGGYW PRIDATAGIG REWLRGENVT DKDYWRKGVR LELSQMLFDG FYTCNQVCRL
KHSGQARYFE FMDTMESVGL ESYRSYADVL RYREMVRLAK RNYDYHQEIF NQVSSRVRAG
VGAGVDVSQI SARVALAQSN YLTELSNLHD VTARFQRIIG ELPEENMQAA LLPTDGIPAT
ASDALKDAYQ HNPGFLATMS DINAAKHAVK VQESKFYPRL DFKARHDWSW DLDGIDGRQD
ESVVELVMTY NILNGGSDAA AVRQYREKMY RSVDMKDKAA TDLRQTMTIA YNDRQIIGQQ
VRYLDAHRKN LDQVRVAYRE QFNIGKRTLL DLLDTENEYY QAQRAYYNGF FDLTIANARA
LAGMGKLLTT MNVVRGELPS LKDINIPLPR VTDEDVPPVE IPVPVTMAKK F