| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1820 |
|---|
| Symbol | |
|---|
| ID | 4571162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 2076394 |
|---|
| End bp | 2078154 |
|---|
| Gene Length | 1761 bp |
|---|
| Protein Length | 586 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639766402 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_912260 |
|---|
| Protein GI | 119357616 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.120135 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAGA AGGAAAACGC GCTTAAAAAA CTTGCAGGTA ATGCTGTTTC GGGTATGGTG
GCGACGATTA TTTATATGGT CAGCCGCCTT CTTCTTACAC CGTTCATTCT GCAGTATCTC
TCTCTGGAGG AGTTCGGCTT ATGGTCGCTC TGTTTTATCA TTCTCTCTTA TGCCGGAATG
GGAGGGTTCG GAGTAAACAG TACCTATATC CGTTATTCGG CAAGATACCT TGCGGAGGGA
AAAGAGAAAG AGATCAGCAA GCTGCTCTCA ACCGGTGTTG CCTATATGTT TTCATTCTGT
CTCTTTTTCT GTCTGGTTCT TTATCTGATT ATGCCTTTTC TTCTCGAAAG GTTCCATATA
GCGCCTGCGC AGCAGGATCT TGCCTCAACA ATATTTCTTG GTACTGCTGC AGTTTTCAGT
CTTGAACTTA CTCTTGGCGG ATTCCGGTTT GTCATTAACG GAATGCATGA GTTTTTAAAG
GAGAAAATCG TTTCAACCGT TGCCGGACTC ATTGAGATTG GCGCTATCCT TCTGTTTCTT
TACTTCGGAG CGGGGGTTAA AGGGCTCTTG TACGCGTTTG CCTTAAGGCT GGTTCTTGAA
ACTATTGGCT GCTGGGCAAT TGCCCGATCC TTGCTTCCTT CGCTCTCTGT TTCATGGAGA
TTGATCAGCC GTGAAAATTT CAGGCTTTTT CTCGGTTTTG GCGGCAAAGT CCAGGTGCTC
GGCATTCTGG GTATCTTTCT TACGGCGCTT GACAGATTGT TCATTACGGC AATTGCCGGA
CTTGCCGCAG GAGGCATGTT TGAGATAGGT CGAAAGCTCC CTTCAACGGC AGGGGGTATC
TCATCATCCG CATTCGGTCC GTTTTTATCT ACCGCATCTC ATATCGAAGG CCGTTGGGCA
GGTGAAAAAC CGGATGCTTT TCCGGACAGG CTTAAAACCT ATGGTCTTAT TGTTGCAACA
ACCGTTACGC TATCCCTTGT CCCGCTTTTT TTTCTACTGC CCGTGCAAAA ACGGCTGCAG
GGGGCAAGTC CGCTGATCGC TGTATTTGCA GGGGTTTTAA CCGTTGTTCT GTTTTATCTG
CTCAATCGCA GAATGAAAAA TGAAAATTTT CTCGATAACA TTGAATTAAA GCAGCTTTAT
CTCAACGGGA TTCGTTTTAC CAACATGATC AACTCGACAC TGTTTCTTTT TCTTGTCGCC
ATGGCTCATC CACTGATGAA TGCATGGGTT GGCAAGGAGT ATGCGCGTGC TGCCGATGTT
ATGATCTTTT TATCGACAGC CTACTCGATT CAATTGTGTA CAGGTCCGAT AACCATGATA
TTTCGGGGAA TTGATCGTAA CGGAAGAGAG CTTGAGTACA TGCTGGTTCA GGTTATACTG
ATGGTTATCT GGATTCCTGC CGGAACGATT GCATCGGGAT TGATCGGATC AGCAGCAGCT
ATTGCGTGCA GTTCGATAGT CAGCACATGC TTTCTTTTCT GGCGGAGCAA TAACACGTTT
CAGATTCGAT TCCGTAAATT TGTTTCAGTC ACCGTTATCC CTGCGCTTGT TCCTCTCTTG
CCGGCAGTGG CTGTTTTTGC CGTTTCGGAG ATCTATCCCG CAGAAGGGAG ACTTGTGGCT
GTCTTGCAGG TTCTTGTTTG CGGTGTTGTC TATGTGTTGC TTTCTGTCAT GATGTTCTGG
AAATTTATCC TGAACGGCGA GGAAAAATCA AAAGCACTGG AAATGATACC TTTTAACCGG
AAACGGAATC CTCCATGCTG A
|
|---|
| Protein sequence | MNQKENALKK LAGNAVSGMV ATIIYMVSRL LLTPFILQYL SLEEFGLWSL CFIILSYAGM
GGFGVNSTYI RYSARYLAEG KEKEISKLLS TGVAYMFSFC LFFCLVLYLI MPFLLERFHI
APAQQDLAST IFLGTAAVFS LELTLGGFRF VINGMHEFLK EKIVSTVAGL IEIGAILLFL
YFGAGVKGLL YAFALRLVLE TIGCWAIARS LLPSLSVSWR LISRENFRLF LGFGGKVQVL
GILGIFLTAL DRLFITAIAG LAAGGMFEIG RKLPSTAGGI SSSAFGPFLS TASHIEGRWA
GEKPDAFPDR LKTYGLIVAT TVTLSLVPLF FLLPVQKRLQ GASPLIAVFA GVLTVVLFYL
LNRRMKNENF LDNIELKQLY LNGIRFTNMI NSTLFLFLVA MAHPLMNAWV GKEYARAADV
MIFLSTAYSI QLCTGPITMI FRGIDRNGRE LEYMLVQVIL MVIWIPAGTI ASGLIGSAAA
IACSSIVSTC FLFWRSNNTF QIRFRKFVSV TVIPALVPLL PAVAVFAVSE IYPAEGRLVA
VLQVLVCGVV YVLLSVMMFW KFILNGEEKS KALEMIPFNR KRNPPC
|
|---|
| |