Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1782 |
Symbol | |
ID | 4571144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 2026178 |
End bp | 2029624 |
Gene Length | 3447 bp |
Protein Length | 1148 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639766365 |
Product | ribonucleotide-diphosphate reductase subunit alpha |
Protein accession | YP_912223 |
Protein GI | 119357579 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.360896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAAATAT CCCGTTTGTT TACCGCCCAA GGCGAAAATG TGTTCGATCG TTTCGATTAC ACGACGAGAA GTTCTGTGCT GCGTAATCCC GATGGATCCA AGGTTTTTGA AATGAGCGAT ATCGAGGTTC CCAAACAGTG GTCGCAGATG GCTGCTGATA TTCTTGCTCA GAAGTATTTT CGTAAAACCG GTGTACCGCA ACGTGATGAG GCCGGCAATA CTCTTCTGGA TGATGCGGGA AATCCCGTAA CCGGCAGCGA GCATTCTATC AGGGAAGTTG TACACCGTCT GGCCGGATGC TGGAAATCAT GGGGTGAAAA GTATCGTTAT TTCGATACGC CTGAGGACGC TGAAGCATTT TATGATGAGA CCGCCTTTAT GCTGCTCAGA CAGATGGGCG CGCCGAATTC GCCGCAGTGG TTTAATACGG GTCTTAATTT TGCCTACGGC ATTGAGGGTC CTGCCCAGGG GCACTACCAT GTCGATCCGG AGACGCTCGA AGTCAGGGAA TCGGAAGATG CCTACACAAG GCCGCAGGCT CATGCCTGTT TTATCCAGTC GGTCAAGGAT GATCTTGTCA ATGATGGGGG GATTTTTGAT CTTGCCGTTC GGGAAGCCAG AGTTTTCAAA TTCGGCAGTG GATCGGGAAC CAACTATTCC AGTCTTCGTT CAGGTGGCGA GCAGCTTAGC GGCGGGGGGA GTTCTTCCGG GTTGATGAGT TTTCTTAAAA TTTTTGATTC AGCAGCCGGC GCTATTAAAT CGGGAGGTAC CACCCGGAGG GCTGCCAAAA TGGTGATTGT GGATATCGAT CATCCCGATG TTGACCGGTT TATCGATTGG AAGGCGAAAG AGGAGGACAA GGTTGCTTCG CTTGTCGCCG GTTCACGAAT CTGTTCGCGC TTTTTACAGG CGATTGTAAA CGAGGCTGTT GAGAACGGTT CCGACAGAAA GGAAAATCCG GGGTTGCAGC AGCTCATCAA AAACGCGCTC GGTCGGGCTG TTCCGATGAG CTACATTGTC AGGGTTCTTG CTCTTGTTGA TCAGGGGTAC ACGACGCTTG ATTTTGACGA GTATGATTCG AACTATGAGT CGGAGGCCTA TCAGACTGTT GGCGGGCAGA ACTCAAACAA TACCGTCAGG GTGACCAATG CGTTTATGAA AGCTGTTGAG AATGATGAAA TCTGGCTTCT CAAAGAGCGC ACTACCGGTA AAACCGCCAA GGCGCTTAAA GCTCGTGACC TCTGGGAAAA GATTCTGCTC AGCGCATGGA AGTGCGCGGA TCCCGGATTA CAGTTCGATA CCACGATTAA CGAGTGGCAC ACCTGTCCTC AAAGCGGTCG CATCAATGCA AGCAACCCCT GTTCGGAGTA TATGTTTCTC GATGATACCG CCTGTAACCT TGCCAGTCTC AACCTGATCC ATTTTGTTGA CGAAGCTTCG GGCAGGATCA AAATAAAGGA GCTCTTGCAC GCCTCAAGTC TCTGGACTGT CGTGCTGGAG ATTTCCGTTC TGATGGCTCA TTTTCCTTCA AAAGATATTG CTCGCCTCAG CTATGAATTT CGTACGCTCG GACTCGGGTT CGCCAATCTC GGCACGGTGC TGATGGTGCT TGGTATTCCG TACGACTCTC CGAAAGCTCT CGCCATTGCC GGTGCCATTG GCGCATTGAT GACCGGACAG GCTTATGTTA CCTCGGCTGA AATGGCGCGT GATCTGGGGA CTTTTGCCGG ATATACTGCA AATGCAAAGG ATATGCTTCG CGTTATCCGT AATCACCGGC GTGCAGCTCA CAATATGTCG GAAGAGGAGT ATGAGGGTTT GTCGGTCATG CCTCGCGGTA TTGACTCGGA GTATTGTCCT AAAGATCTTT TTGAGGCAGC AGGAAAAGTG TGGGATGATG CTCTCCGGAA AGGTGAAAAA CATGGTTTCC GCAATGCCCA GGTGAGTGTG ATTGCTCCAA CAGGGACGAT AGGATTGGTG ATGGATTGCG ATACTACCGG TATCGAACCT GAGTTCGCCA TTGTCAAATT CAAAAAACTG GCGGGCGGAG GCTATTTCAA GATTGTCAAT CAGTCGGTGC ACAAGGCGCT TGAGCGGTTG GGGTACACCA TTTCCCAGAT TGACGATATC GAGAGATACT GTAAAGGGCA TGGCACGCTT GCGGGTTGTA ACGCCATCAA TCGCCCGTGG CTTATAGCCA GAGGGTTCAG GGATGAACAT ATCGAAATGA TCGAGGCGCA GCTTGAAGCG GTTTTTGATA TTCGTTTTGC CTTCAACAGA TGGATTCTCG GCGAGGAGTT CTGCGCTTCG CTCGGGTTCA GTGAGGAGCA ATTGAGCGAT CCTGGGTTTG ATATGCTCCT TGCTCTTGGA GCATGTCAGG ATGATGTGGA CGCTGCCAAC GACTATGTCT GCGGCACCAT GACCATTGAA GGCGCTCCGC ACCTGAAACT CGAGCATTTG CCGGTTTTTG ACTGCGCAAG TTCCTGTGGT AAAAAAGGGC TTCGTTATAT CAAGCATATG GCGCATGTGC GCATGATGTC TGCGGTACAG CCCTTTATTT CAGGTGCTAT CTCAAAAACC GTCAATATGC CTCCAACGGC TACGACTGTT GAGATTTCTG AGGTTTACAA GTCGGCATGG CAGCATATGG TCAAAGCTAT CACGGTGTAT CGTGACGGTT CAAAATTGTC GCAGCCGCTC AATAATTCGA GCTACCAGGA TCTTGATGAG GTGATAATGC TTGGTACAGA GGAGAGCCTT GACGAGACAA AAGGACCTAA AGAGGTTCAG GAGCGGATTG TCGAACGGGT TTATCACCGT TCTGAGCGCA GGATGCTTCC CAAACGGAGG AAAGGGTATA TTCGCGAAGC CCATGTGGGC GGCCACAAGG TTTTTCTCAG AACAGGGGAG TATGAGGATG GATCTCTCGG AGAGGTTTTT ATCGATATGT ACAAGGAGGG GGCATCATTC AAAGGGTTGC TCAACTGCTT TGCCGTGCTT GCTTCAAAAG CCCTCCAGTA CGGAATGCCT CTCGATGAAC TGGTTGACAG TTTTACCTTT ACCCGGTTCG AGCCTGCAGG TGCCGTACAG GGGCACAATG CAATAAAGAA CTCCACCTCA ATTCTTGACT ATGTTTTCCG CTCGATCGGT TATGATTATC TCGGCAGAAA AGACTTTGTA CATGTCAAAG CTGTCGATGA GGTTTCCGGT GGAGATCAGG ATGCGAAAAT GAACGGAAAT GGCTCAACAG ATCTTCATCA TGTTGCTGAG CCGGCTCTGA CCCATCATGC AGCGGAATCT TCATCAGGCT TGAAAAGCCA GATTCTGCAG GCAAGAGTGC AGGGATATAC CGGCGAACAG TGTGAGAACT GCGGTTCTAT GCGTGTGCGT CAGAACGGGA CCTGCAAGGT GTGCGAAGAC TGCGGAACGA CTACCGGCTG CTCATAA
|
Protein sequence | MKISRLFTAQ GENVFDRFDY TTRSSVLRNP DGSKVFEMSD IEVPKQWSQM AADILAQKYF RKTGVPQRDE AGNTLLDDAG NPVTGSEHSI REVVHRLAGC WKSWGEKYRY FDTPEDAEAF YDETAFMLLR QMGAPNSPQW FNTGLNFAYG IEGPAQGHYH VDPETLEVRE SEDAYTRPQA HACFIQSVKD DLVNDGGIFD LAVREARVFK FGSGSGTNYS SLRSGGEQLS GGGSSSGLMS FLKIFDSAAG AIKSGGTTRR AAKMVIVDID HPDVDRFIDW KAKEEDKVAS LVAGSRICSR FLQAIVNEAV ENGSDRKENP GLQQLIKNAL GRAVPMSYIV RVLALVDQGY TTLDFDEYDS NYESEAYQTV GGQNSNNTVR VTNAFMKAVE NDEIWLLKER TTGKTAKALK ARDLWEKILL SAWKCADPGL QFDTTINEWH TCPQSGRINA SNPCSEYMFL DDTACNLASL NLIHFVDEAS GRIKIKELLH ASSLWTVVLE ISVLMAHFPS KDIARLSYEF RTLGLGFANL GTVLMVLGIP YDSPKALAIA GAIGALMTGQ AYVTSAEMAR DLGTFAGYTA NAKDMLRVIR NHRRAAHNMS EEEYEGLSVM PRGIDSEYCP KDLFEAAGKV WDDALRKGEK HGFRNAQVSV IAPTGTIGLV MDCDTTGIEP EFAIVKFKKL AGGGYFKIVN QSVHKALERL GYTISQIDDI ERYCKGHGTL AGCNAINRPW LIARGFRDEH IEMIEAQLEA VFDIRFAFNR WILGEEFCAS LGFSEEQLSD PGFDMLLALG ACQDDVDAAN DYVCGTMTIE GAPHLKLEHL PVFDCASSCG KKGLRYIKHM AHVRMMSAVQ PFISGAISKT VNMPPTATTV EISEVYKSAW QHMVKAITVY RDGSKLSQPL NNSSYQDLDE VIMLGTEESL DETKGPKEVQ ERIVERVYHR SERRMLPKRR KGYIREAHVG GHKVFLRTGE YEDGSLGEVF IDMYKEGASF KGLLNCFAVL ASKALQYGMP LDELVDSFTF TRFEPAGAVQ GHNAIKNSTS ILDYVFRSIG YDYLGRKDFV HVKAVDEVSG GDQDAKMNGN GSTDLHHVAE PALTHHAAES SSGLKSQILQ ARVQGYTGEQ CENCGSMRVR QNGTCKVCED CGTTTGCS
|
| |