Gene Cpha266_1782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1782 
Symbol 
ID4571144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp2026178 
End bp2029624 
Gene Length3447 bp 
Protein Length1148 aa 
Translation table11 
GC content50% 
IMG OID639766365 
Productribonucleotide-diphosphate reductase subunit alpha 
Protein accessionYP_912223 
Protein GI119357579 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0209] Ribonucleotide reductase, alpha subunit 
TIGRFAM ID[TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.360896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAATAT CCCGTTTGTT TACCGCCCAA GGCGAAAATG TGTTCGATCG TTTCGATTAC 
ACGACGAGAA GTTCTGTGCT GCGTAATCCC GATGGATCCA AGGTTTTTGA AATGAGCGAT
ATCGAGGTTC CCAAACAGTG GTCGCAGATG GCTGCTGATA TTCTTGCTCA GAAGTATTTT
CGTAAAACCG GTGTACCGCA ACGTGATGAG GCCGGCAATA CTCTTCTGGA TGATGCGGGA
AATCCCGTAA CCGGCAGCGA GCATTCTATC AGGGAAGTTG TACACCGTCT GGCCGGATGC
TGGAAATCAT GGGGTGAAAA GTATCGTTAT TTCGATACGC CTGAGGACGC TGAAGCATTT
TATGATGAGA CCGCCTTTAT GCTGCTCAGA CAGATGGGCG CGCCGAATTC GCCGCAGTGG
TTTAATACGG GTCTTAATTT TGCCTACGGC ATTGAGGGTC CTGCCCAGGG GCACTACCAT
GTCGATCCGG AGACGCTCGA AGTCAGGGAA TCGGAAGATG CCTACACAAG GCCGCAGGCT
CATGCCTGTT TTATCCAGTC GGTCAAGGAT GATCTTGTCA ATGATGGGGG GATTTTTGAT
CTTGCCGTTC GGGAAGCCAG AGTTTTCAAA TTCGGCAGTG GATCGGGAAC CAACTATTCC
AGTCTTCGTT CAGGTGGCGA GCAGCTTAGC GGCGGGGGGA GTTCTTCCGG GTTGATGAGT
TTTCTTAAAA TTTTTGATTC AGCAGCCGGC GCTATTAAAT CGGGAGGTAC CACCCGGAGG
GCTGCCAAAA TGGTGATTGT GGATATCGAT CATCCCGATG TTGACCGGTT TATCGATTGG
AAGGCGAAAG AGGAGGACAA GGTTGCTTCG CTTGTCGCCG GTTCACGAAT CTGTTCGCGC
TTTTTACAGG CGATTGTAAA CGAGGCTGTT GAGAACGGTT CCGACAGAAA GGAAAATCCG
GGGTTGCAGC AGCTCATCAA AAACGCGCTC GGTCGGGCTG TTCCGATGAG CTACATTGTC
AGGGTTCTTG CTCTTGTTGA TCAGGGGTAC ACGACGCTTG ATTTTGACGA GTATGATTCG
AACTATGAGT CGGAGGCCTA TCAGACTGTT GGCGGGCAGA ACTCAAACAA TACCGTCAGG
GTGACCAATG CGTTTATGAA AGCTGTTGAG AATGATGAAA TCTGGCTTCT CAAAGAGCGC
ACTACCGGTA AAACCGCCAA GGCGCTTAAA GCTCGTGACC TCTGGGAAAA GATTCTGCTC
AGCGCATGGA AGTGCGCGGA TCCCGGATTA CAGTTCGATA CCACGATTAA CGAGTGGCAC
ACCTGTCCTC AAAGCGGTCG CATCAATGCA AGCAACCCCT GTTCGGAGTA TATGTTTCTC
GATGATACCG CCTGTAACCT TGCCAGTCTC AACCTGATCC ATTTTGTTGA CGAAGCTTCG
GGCAGGATCA AAATAAAGGA GCTCTTGCAC GCCTCAAGTC TCTGGACTGT CGTGCTGGAG
ATTTCCGTTC TGATGGCTCA TTTTCCTTCA AAAGATATTG CTCGCCTCAG CTATGAATTT
CGTACGCTCG GACTCGGGTT CGCCAATCTC GGCACGGTGC TGATGGTGCT TGGTATTCCG
TACGACTCTC CGAAAGCTCT CGCCATTGCC GGTGCCATTG GCGCATTGAT GACCGGACAG
GCTTATGTTA CCTCGGCTGA AATGGCGCGT GATCTGGGGA CTTTTGCCGG ATATACTGCA
AATGCAAAGG ATATGCTTCG CGTTATCCGT AATCACCGGC GTGCAGCTCA CAATATGTCG
GAAGAGGAGT ATGAGGGTTT GTCGGTCATG CCTCGCGGTA TTGACTCGGA GTATTGTCCT
AAAGATCTTT TTGAGGCAGC AGGAAAAGTG TGGGATGATG CTCTCCGGAA AGGTGAAAAA
CATGGTTTCC GCAATGCCCA GGTGAGTGTG ATTGCTCCAA CAGGGACGAT AGGATTGGTG
ATGGATTGCG ATACTACCGG TATCGAACCT GAGTTCGCCA TTGTCAAATT CAAAAAACTG
GCGGGCGGAG GCTATTTCAA GATTGTCAAT CAGTCGGTGC ACAAGGCGCT TGAGCGGTTG
GGGTACACCA TTTCCCAGAT TGACGATATC GAGAGATACT GTAAAGGGCA TGGCACGCTT
GCGGGTTGTA ACGCCATCAA TCGCCCGTGG CTTATAGCCA GAGGGTTCAG GGATGAACAT
ATCGAAATGA TCGAGGCGCA GCTTGAAGCG GTTTTTGATA TTCGTTTTGC CTTCAACAGA
TGGATTCTCG GCGAGGAGTT CTGCGCTTCG CTCGGGTTCA GTGAGGAGCA ATTGAGCGAT
CCTGGGTTTG ATATGCTCCT TGCTCTTGGA GCATGTCAGG ATGATGTGGA CGCTGCCAAC
GACTATGTCT GCGGCACCAT GACCATTGAA GGCGCTCCGC ACCTGAAACT CGAGCATTTG
CCGGTTTTTG ACTGCGCAAG TTCCTGTGGT AAAAAAGGGC TTCGTTATAT CAAGCATATG
GCGCATGTGC GCATGATGTC TGCGGTACAG CCCTTTATTT CAGGTGCTAT CTCAAAAACC
GTCAATATGC CTCCAACGGC TACGACTGTT GAGATTTCTG AGGTTTACAA GTCGGCATGG
CAGCATATGG TCAAAGCTAT CACGGTGTAT CGTGACGGTT CAAAATTGTC GCAGCCGCTC
AATAATTCGA GCTACCAGGA TCTTGATGAG GTGATAATGC TTGGTACAGA GGAGAGCCTT
GACGAGACAA AAGGACCTAA AGAGGTTCAG GAGCGGATTG TCGAACGGGT TTATCACCGT
TCTGAGCGCA GGATGCTTCC CAAACGGAGG AAAGGGTATA TTCGCGAAGC CCATGTGGGC
GGCCACAAGG TTTTTCTCAG AACAGGGGAG TATGAGGATG GATCTCTCGG AGAGGTTTTT
ATCGATATGT ACAAGGAGGG GGCATCATTC AAAGGGTTGC TCAACTGCTT TGCCGTGCTT
GCTTCAAAAG CCCTCCAGTA CGGAATGCCT CTCGATGAAC TGGTTGACAG TTTTACCTTT
ACCCGGTTCG AGCCTGCAGG TGCCGTACAG GGGCACAATG CAATAAAGAA CTCCACCTCA
ATTCTTGACT ATGTTTTCCG CTCGATCGGT TATGATTATC TCGGCAGAAA AGACTTTGTA
CATGTCAAAG CTGTCGATGA GGTTTCCGGT GGAGATCAGG ATGCGAAAAT GAACGGAAAT
GGCTCAACAG ATCTTCATCA TGTTGCTGAG CCGGCTCTGA CCCATCATGC AGCGGAATCT
TCATCAGGCT TGAAAAGCCA GATTCTGCAG GCAAGAGTGC AGGGATATAC CGGCGAACAG
TGTGAGAACT GCGGTTCTAT GCGTGTGCGT CAGAACGGGA CCTGCAAGGT GTGCGAAGAC
TGCGGAACGA CTACCGGCTG CTCATAA
 
Protein sequence
MKISRLFTAQ GENVFDRFDY TTRSSVLRNP DGSKVFEMSD IEVPKQWSQM AADILAQKYF 
RKTGVPQRDE AGNTLLDDAG NPVTGSEHSI REVVHRLAGC WKSWGEKYRY FDTPEDAEAF
YDETAFMLLR QMGAPNSPQW FNTGLNFAYG IEGPAQGHYH VDPETLEVRE SEDAYTRPQA
HACFIQSVKD DLVNDGGIFD LAVREARVFK FGSGSGTNYS SLRSGGEQLS GGGSSSGLMS
FLKIFDSAAG AIKSGGTTRR AAKMVIVDID HPDVDRFIDW KAKEEDKVAS LVAGSRICSR
FLQAIVNEAV ENGSDRKENP GLQQLIKNAL GRAVPMSYIV RVLALVDQGY TTLDFDEYDS
NYESEAYQTV GGQNSNNTVR VTNAFMKAVE NDEIWLLKER TTGKTAKALK ARDLWEKILL
SAWKCADPGL QFDTTINEWH TCPQSGRINA SNPCSEYMFL DDTACNLASL NLIHFVDEAS
GRIKIKELLH ASSLWTVVLE ISVLMAHFPS KDIARLSYEF RTLGLGFANL GTVLMVLGIP
YDSPKALAIA GAIGALMTGQ AYVTSAEMAR DLGTFAGYTA NAKDMLRVIR NHRRAAHNMS
EEEYEGLSVM PRGIDSEYCP KDLFEAAGKV WDDALRKGEK HGFRNAQVSV IAPTGTIGLV
MDCDTTGIEP EFAIVKFKKL AGGGYFKIVN QSVHKALERL GYTISQIDDI ERYCKGHGTL
AGCNAINRPW LIARGFRDEH IEMIEAQLEA VFDIRFAFNR WILGEEFCAS LGFSEEQLSD
PGFDMLLALG ACQDDVDAAN DYVCGTMTIE GAPHLKLEHL PVFDCASSCG KKGLRYIKHM
AHVRMMSAVQ PFISGAISKT VNMPPTATTV EISEVYKSAW QHMVKAITVY RDGSKLSQPL
NNSSYQDLDE VIMLGTEESL DETKGPKEVQ ERIVERVYHR SERRMLPKRR KGYIREAHVG
GHKVFLRTGE YEDGSLGEVF IDMYKEGASF KGLLNCFAVL ASKALQYGMP LDELVDSFTF
TRFEPAGAVQ GHNAIKNSTS ILDYVFRSIG YDYLGRKDFV HVKAVDEVSG GDQDAKMNGN
GSTDLHHVAE PALTHHAAES SSGLKSQILQ ARVQGYTGEQ CENCGSMRVR QNGTCKVCED
CGTTTGCS