Gene Cpha266_1774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1774 
Symbol 
ID4570118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp2016841 
End bp2018610 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content49% 
IMG OID639766357 
ProductDEAD/DEAH box helicase domain-containing protein 
Protein accessionYP_912215 
Protein GI119357571 
COG category[K] Transcription
[J] Translation, ribosomal structure and biogenesis
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAG AGACCGTTAT TGCCCAGAAT TTTCGCAGTT TACAGTTAAT CGAGCCTTTA 
ATGAAGGCGC TTGAGGAGGT GGGTTACGAA AACCCGACGC CTATTCAGGC TCAAACTATT
CCGTTGCTTC TCGAAGGTCG CGATCTTCTC GGGCAGGCGC AGACAGGAAC CGGCAAAACT
GCCGCTTTTG CGCTACCGAT TCTTTCCAAT ATTACTATCG CAAGACGGGA GCCTCAGGCG
CTTGTGCTTG CTCCTACGAG GGAACTTGCC ATTCAGGTGG CCGAAGCATT CCATCGTTAT
GCCGAATATC TTAAAGGGTT TCATGTGCTG CCTATTTATG GCGGACAGGA TTATGGTATT
CAGCTTCGTA TGCTCAAACA GGGCGTGCAT GTCGTGGTCG GTACGCCGGG CCGCGTGATG
GATCATATGC GACGCGGGTC GTTGAATCTT GACGGGTTGC AGTGTCTTGT GCTTGACGAA
GCTGATGAAA TGCTTCGCAT GGGCTTTATC GATGATGTGG AATGGATTCT GGATCAGACG
CCAAAAGGTC GCCAGGTTGC GTTGTTCTCT GCAACCCTGC CGGTGCCTAT TCGCCGTATT
GCCCAGAAGT ACCTCAATAA TCCGGCAGAG ATCACCATTC AGAACAAAAC CACGACGGTT
GAGGCTATTC GTCAGCGGTA CTGGATTGTT GGCGGTAGCC ACAAGCTTGA TGTCCTGACA
AGAATTCTTG AAGTCGAGCC TTTTGACGGT ATTCTTATTT TTGTACGAAC CAAGACCATG
ACGCTTGAAC TCGCCGAAAA GCTCCAGGCC AGAGGGTATG ACGCTTCTGC TCTGAATGGT
GATATGGCGC AGAATATGCG TGAAAGGACT GTCGAGCAGT TGAAGAGCGG TGCGCTCAAT
ATTGTTATCG CAACCGATGT TGCCGCCCGA GGTCTGGATG TTGATCGAAT CAGTCATGTT
ATCAATTACG ATATTCCTTC GGATACCGAA TCCTATGTTC ACCGTATCGG ACGTACGGGC
CGCGCAGGGC GAAGTGGCGA GGCGATTCTT TTTGTCTCTC CGCGTGAGAA AAATATGCTG
TATGCGATTG AAAAAGCTAC TCGAAAGAGA ATAGAGCTTA TGGAGCTGCC TTCAACGGAG
ATTATCAACA ACAAGAGGAT ATCCAAGTTC AAACAGCGCA TCACCGATAC CATTGCTGCC
GGTGAACTTG ATTTTTATTC ACGGCTTATC GAGCAGTATT GCCATGAGCA TGATGTGCCC
GAACTTGATG CTGCCGCTGC ACTTGCCTCG CTGCTTCAGG GTGAAACGCC GTTGCTTCTT
TCAGCAAAAC CTGAAAGAAC AAGGGATCAT GACGATCGCC CAAGGTCGCA AAGCGATTCT
GGATTCGCAA AAAAACGTAA AAAAGGCGAG ATGTACGGCG ACGAGGGCAG ACAGCGGTAT
CGCATTGAGG TTGGCAGTAC TCACGGTGTC AAGGCCGGCA ATATTCTTGG CGCTATTATC
AATGAGATTG GCCTTGATCC TGAAGCGGTA GGGCAGATAT CGATTTCCGA TACCTACAGT
TCAGTAGAGC TTCCGGAAGG TATGCCCGAA GAGGTCTTTC ATGAACTTCG TAAAGTCAGG
GTATGTGGCC GTCAATTGAG ACTTACAAAA ATAGAAGGGC AGGACAGCGC CTCTTCGTAC
GCTCCAAAAA AGAATTTCAG GAAATCCGCA AAACCGGAGA AAGACCAGCA GGCATTTTTT
ACCGGACAGA AAAAAAAGCG ACGTAACTGA
 
Protein sequence
MSEETVIAQN FRSLQLIEPL MKALEEVGYE NPTPIQAQTI PLLLEGRDLL GQAQTGTGKT 
AAFALPILSN ITIARREPQA LVLAPTRELA IQVAEAFHRY AEYLKGFHVL PIYGGQDYGI
QLRMLKQGVH VVVGTPGRVM DHMRRGSLNL DGLQCLVLDE ADEMLRMGFI DDVEWILDQT
PKGRQVALFS ATLPVPIRRI AQKYLNNPAE ITIQNKTTTV EAIRQRYWIV GGSHKLDVLT
RILEVEPFDG ILIFVRTKTM TLELAEKLQA RGYDASALNG DMAQNMRERT VEQLKSGALN
IVIATDVAAR GLDVDRISHV INYDIPSDTE SYVHRIGRTG RAGRSGEAIL FVSPREKNML
YAIEKATRKR IELMELPSTE IINNKRISKF KQRITDTIAA GELDFYSRLI EQYCHEHDVP
ELDAAAALAS LLQGETPLLL SAKPERTRDH DDRPRSQSDS GFAKKRKKGE MYGDEGRQRY
RIEVGSTHGV KAGNILGAII NEIGLDPEAV GQISISDTYS SVELPEGMPE EVFHELRKVR
VCGRQLRLTK IEGQDSASSY APKKNFRKSA KPEKDQQAFF TGQKKKRRN