| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1763 |
|---|
| Symbol | |
|---|
| ID | 4570107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | + |
|---|
| Start bp | 2004827 |
|---|
| End bp | 2005558 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639766346 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_912204 |
|---|
| Protein GI | 119357560 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCACA TTATCATGAT CACCGGTGCC GGTAAAGGAA TAGGCCGGGC TATCGCTCTT
GCGTTCGCAA AAGCCGGAAA AGAACAACCA TCATTTGAAC CGGTTCTCGT GCTCTCGTCA
AGAACGGAGA GCGATCTGCG ATCTCTGGCT TTCGAGTGTC AGGCTCACGG CGCCGAAACG
TTGTGCATAC AGGCTGATAT TGCCGTTTCC GAAGAACGGG AAAAACTGGT TAAAAAAGCA
GTTGAAAAGT ACGGGACAAT AGATTGTCTG ATCAACAATG CGGGAGTAGG CCGATTCAAA
CCTTTTGGAG AAATGACGGA GGAAGATTTT GACTATACTG TCGCCACCAA CCTTAAAGGC
ACTTTTTTTC TCACGCAAAG CGTTTTCAGA GCGATGGAGA AAAAAAAGTC GGGTCATATC
TTTTTTATAA CCTCCATTGC AGCGGAAAAG GCGTTCAAAA GCTCGACAAT CTACTCCATG
TCGAAATTCG GACAAAAGGG ACTGCTTGAA GCTTTGCGAC TCTATGCCGC AGAATCCAAC
ATCAGAATCA CCAACGTCAT GCCAGGCGCA GTCTTCACAC CAATGTGGGG CGAAGTATCC
GAAAACATGC AAGCCCTGAT GATGAGGCCT GAAGATATTG CCGGCCCTGT TGTCAACACC
TATCTTCTTC CCTCAAGAAC AACAGTGGAA GAACTGGTCA TAAGACCGGT TGGCGGCGAT
ATCAACGAGT AA
|
|---|
| Protein sequence | MQHIIMITGA GKGIGRAIAL AFAKAGKEQP SFEPVLVLSS RTESDLRSLA FECQAHGAET
LCIQADIAVS EEREKLVKKA VEKYGTIDCL INNAGVGRFK PFGEMTEEDF DYTVATNLKG
TFFLTQSVFR AMEKKKSGHI FFITSIAAEK AFKSSTIYSM SKFGQKGLLE ALRLYAAESN
IRITNVMPGA VFTPMWGEVS ENMQALMMRP EDIAGPVVNT YLLPSRTTVE ELVIRPVGGD
INE
|
|---|
| |