Gene Cpha266_1760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1760 
Symbol 
ID4570104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp2002056 
End bp2003354 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content51% 
IMG OID639766343 
ProductMiaB-like tRNA modifying enzyme YliG 
Protein accessionYP_912201 
Protein GI119357557 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC ATAACGTCTT TCTGCTAAGC CTCGGATGCT CAAAAAACAC TGTAGACTCC 
GAACGCCTCA TGGCACAGGC GGAGGCATCC GGCATAACGT TTACCGAAGA GGCCGACCTT
GCCGATACCA TCCTTATTAA CACCTGCGGG TTCATCGAAG ATGCCAAGGA AGAGTCGATT
GCTGAAATAC TTGCAGCCGT TGAAAAAAAA ACTCAAGGTA TTGTTTCAGG CGTTTACGTT
ATGGGGTGCC TCAGCGAACT CTACCGCACG GAAATGAGAG AAGAGCTTCC GGAGATTGAC
GGATTTTTCG GCACCCGTGA ACTGCCTGCC CTGCTTCAGG CAATCGGAGC TCAATACCGT
GACGAGCTGT ATGACCATCG ATCGCTCCTT ACACCACCGC ATATTTCCTA TCTTAAAATT
GCCGAAGGTT GCAATCGCTC ATGTTCCTTC TGCTCGATCC CGAAAATCAG GGGACGGTAC
AGGAGCCAGC CAATGGAGCA ACTGCTTCGG GAAGCCGCCC TTTTACAGAA AAAAGGGGTT
CGGGAGCTCA ATCTCATCGC ACAGGACACC AGCATCTACG GAAGAGATCT CTACGGCACA
CCCATGCTCC GGGAGCTGCT TGTTCGATTA TCCGACATGG AGTTCCGCTG GATTCGTCTG
CTCTATGCCT ATCCTCTCGA CTTTCCGCTC GAAGTGATTA CCGCCATGAG CGAGCGAAAA
AATATCTGCA ACTACCTCGA TCTTCCCTTG CAGCACTGCA ATGACCGAAT TCTTCGATCA
ATGAACCGGG GAATCACAAA AACGGAAACC GTAAGGCTTC TTGACACGAT CAGAGCCGCA
AACCCGGACA TCAGGCTTCG CACCACCATG CTTGTCGGAT TTCCGGGAGA AACCAGAGCG
GAGTTCGATG AACTCATGCA GTTTATCGAA ACGATGCGCT TCGACAGACT CGGCTGCTTC
CCCTACTGCC ATGAAGAACA CGCCCCATCC TATGCGCTTG AAGATACGGT CAAAGCGGAA
GAGAAGGAGG AACGCAGAGC TGAGTTGATG GAACTTCAGG AGACCATTGC CAAAGAGAAC
AATCAGCTAT TCGAAGGAAA GGAACTTACC GTGCTCATCG ACCAGATTGA GGGCGATATC
GCTATAGCGC GAACGGAATA CGACGCTCCA GAAGTTGACA ACGAATGTTA TCTGACCACC
GGCTCACTCA GGGTCGGAAC AGGAGAGTTC TGCACCGCAC ATATTTCAGA GAGCTCCGCC
TACGAACTGC ACGGCACGAT CACCGCCGTT AATGGATAA
 
Protein sequence
MKKHNVFLLS LGCSKNTVDS ERLMAQAEAS GITFTEEADL ADTILINTCG FIEDAKEESI 
AEILAAVEKK TQGIVSGVYV MGCLSELYRT EMREELPEID GFFGTRELPA LLQAIGAQYR
DELYDHRSLL TPPHISYLKI AEGCNRSCSF CSIPKIRGRY RSQPMEQLLR EAALLQKKGV
RELNLIAQDT SIYGRDLYGT PMLRELLVRL SDMEFRWIRL LYAYPLDFPL EVITAMSERK
NICNYLDLPL QHCNDRILRS MNRGITKTET VRLLDTIRAA NPDIRLRTTM LVGFPGETRA
EFDELMQFIE TMRFDRLGCF PYCHEEHAPS YALEDTVKAE EKEERRAELM ELQETIAKEN
NQLFEGKELT VLIDQIEGDI AIARTEYDAP EVDNECYLTT GSLRVGTGEF CTAHISESSA
YELHGTITAV NG