Gene Cpha266_1759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1759 
Symbol 
ID4570103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp2000936 
End bp2002069 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content52% 
IMG OID639766342 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_912200 
Protein GI119357556 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTTA CTCTTACTGC GACTGATACG AAAAGCTCGG CAAGATGCGG CGTGCTTGAA 
ACCTCTCACG GAACCATCCC GACCCCGATT TTCATGCCGG TTGGTACCCG CGCAAGCGTT
AAATCGCTTG AACCGCATGA GCTTACTGAA CTGGGGGTAA GCATCATCCT TGCCAACACC
TACCATCTCT ATCTCAGACC AGGAAATGAT ATTCTCCGAA AAGCCGGCGG CGTGCACCGG
TTCATGAACT GGAACGGCCC GCTCCTCACC GACAGCGGCG GGTACCAGGT TTACTCACTC
TCTGATCTTC GAAAAATCAC CGAAGAAGGT GTGACCTTCC GCTCACACCT CGATGGATCA
AAACAGCAGT TTACTCCTGA AAACGTAATT GATACCGAGC GCATTATCGG CAGCGATATC
ATAATGCCGC TTGACGAGTG CCCACCGTCA ACCGCTGATC GGGAATATGT GCAGACCTCA
GGAGAACTTA CTATCCGCTG GGCAGAACGG GCAAAAAAAA GGTTTGTCTC CACCTCCCCG
CTCTACGGGC ACAGCCAGTT CCTTTTCGGC ATTACCCAGG GCGGCATTCA TGCCGACCTT
CGAACAATCT CAACCAAAGC TCTGGTGGAT CTTGATTTCG ACGGCTACGC CATTGGCGGC
ATGGCCGTAG GCGAACCTGC CGAAGCGATG TACAGGGTGC TCGAGCTTTC AGATATGCTG
CTTCCCGCAC GCAAACCCCG CTATCTCATG GGTGTGGGCA CACCGGAAAA CATTCTGAAC
GCTATCGAGC GAGGCGTCGA CATGTTCGAC TGCGTCATTC CGACTCGCGA AGGACGAAAC
GGCAGAGTCT ATACCCGCAA CGGAACAATG AACCTGCGGG CAGCGAAATA TGCCGCAGAT
TTCCGTCCTC TGGATGAAGG ATTTGATAAT GAGGTGTGCA GGAATTTCTC CCGAGCCTAT
ATCCGTCATC TTTTGAATGT CGGTGAAATT CTCGGACTGA AGCTTTGCAC CATGCAGAAC
ATCTCCTTCT ACCTCTGGCT CACGACGACT GCACGCGAAC AGATTCAGAA CGGCACCTTC
ACCGAATGGA AAAACGACTT TCTCAGCAGA TTCAACAGCA ATGAAAAAAC ATAA
 
Protein sequence
MNFTLTATDT KSSARCGVLE TSHGTIPTPI FMPVGTRASV KSLEPHELTE LGVSIILANT 
YHLYLRPGND ILRKAGGVHR FMNWNGPLLT DSGGYQVYSL SDLRKITEEG VTFRSHLDGS
KQQFTPENVI DTERIIGSDI IMPLDECPPS TADREYVQTS GELTIRWAER AKKRFVSTSP
LYGHSQFLFG ITQGGIHADL RTISTKALVD LDFDGYAIGG MAVGEPAEAM YRVLELSDML
LPARKPRYLM GVGTPENILN AIERGVDMFD CVIPTREGRN GRVYTRNGTM NLRAAKYAAD
FRPLDEGFDN EVCRNFSRAY IRHLLNVGEI LGLKLCTMQN ISFYLWLTTT AREQIQNGTF
TEWKNDFLSR FNSNEKT