Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1759 |
Symbol | |
ID | 4570103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 2000936 |
End bp | 2002069 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639766342 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_912200 |
Protein GI | 119357556 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATTTTA CTCTTACTGC GACTGATACG AAAAGCTCGG CAAGATGCGG CGTGCTTGAA ACCTCTCACG GAACCATCCC GACCCCGATT TTCATGCCGG TTGGTACCCG CGCAAGCGTT AAATCGCTTG AACCGCATGA GCTTACTGAA CTGGGGGTAA GCATCATCCT TGCCAACACC TACCATCTCT ATCTCAGACC AGGAAATGAT ATTCTCCGAA AAGCCGGCGG CGTGCACCGG TTCATGAACT GGAACGGCCC GCTCCTCACC GACAGCGGCG GGTACCAGGT TTACTCACTC TCTGATCTTC GAAAAATCAC CGAAGAAGGT GTGACCTTCC GCTCACACCT CGATGGATCA AAACAGCAGT TTACTCCTGA AAACGTAATT GATACCGAGC GCATTATCGG CAGCGATATC ATAATGCCGC TTGACGAGTG CCCACCGTCA ACCGCTGATC GGGAATATGT GCAGACCTCA GGAGAACTTA CTATCCGCTG GGCAGAACGG GCAAAAAAAA GGTTTGTCTC CACCTCCCCG CTCTACGGGC ACAGCCAGTT CCTTTTCGGC ATTACCCAGG GCGGCATTCA TGCCGACCTT CGAACAATCT CAACCAAAGC TCTGGTGGAT CTTGATTTCG ACGGCTACGC CATTGGCGGC ATGGCCGTAG GCGAACCTGC CGAAGCGATG TACAGGGTGC TCGAGCTTTC AGATATGCTG CTTCCCGCAC GCAAACCCCG CTATCTCATG GGTGTGGGCA CACCGGAAAA CATTCTGAAC GCTATCGAGC GAGGCGTCGA CATGTTCGAC TGCGTCATTC CGACTCGCGA AGGACGAAAC GGCAGAGTCT ATACCCGCAA CGGAACAATG AACCTGCGGG CAGCGAAATA TGCCGCAGAT TTCCGTCCTC TGGATGAAGG ATTTGATAAT GAGGTGTGCA GGAATTTCTC CCGAGCCTAT ATCCGTCATC TTTTGAATGT CGGTGAAATT CTCGGACTGA AGCTTTGCAC CATGCAGAAC ATCTCCTTCT ACCTCTGGCT CACGACGACT GCACGCGAAC AGATTCAGAA CGGCACCTTC ACCGAATGGA AAAACGACTT TCTCAGCAGA TTCAACAGCA ATGAAAAAAC ATAA
|
Protein sequence | MNFTLTATDT KSSARCGVLE TSHGTIPTPI FMPVGTRASV KSLEPHELTE LGVSIILANT YHLYLRPGND ILRKAGGVHR FMNWNGPLLT DSGGYQVYSL SDLRKITEEG VTFRSHLDGS KQQFTPENVI DTERIIGSDI IMPLDECPPS TADREYVQTS GELTIRWAER AKKRFVSTSP LYGHSQFLFG ITQGGIHADL RTISTKALVD LDFDGYAIGG MAVGEPAEAM YRVLELSDML LPARKPRYLM GVGTPENILN AIERGVDMFD CVIPTREGRN GRVYTRNGTM NLRAAKYAAD FRPLDEGFDN EVCRNFSRAY IRHLLNVGEI LGLKLCTMQN ISFYLWLTTT AREQIQNGTF TEWKNDFLSR FNSNEKT
|
| |