| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1749 |
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| Symbol | |
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| ID | 4571111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 1976830 |
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| End bp | 1978515 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639766332 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_912190 |
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| Protein GI | 119357546 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAGG CGATTGCTTC ACTGTATCCC TCGTTTACGA ATACTTTTTT TTTCAGTCTG
ATCGTCAATG TGCTGGTGCT TGCGCCGAGT GCCTATATGA TGGAGGTGTA TGACCGCGTT
GTAAACAGTC GCAGTCATAC GACGCTCCTT ATGCTCACCA TACTCGTTAT CGGGAGCTAT
CTGCTGCTCG AAGCGCTCGA ATGGGTTCGC AGACAGGTAA TGCACGGAGC AGGCCTGGGG
CTTGACGCAA AGTTGCGGGA TCAGGTAATT GGCGCAATGT TTACAGCACG GTTGCAGAGC
CTCTCCTCAG GAGGCACGCA AGCTTTGCGG GATCTTAAAA CCGTTTGCGA TTTCCTGGCT
TCGACAGCAA TGCTTGCGAT CATTGACATG CCGCTTGCCC TGCTTGTTCT GGTTCTGATT
TTTATGATGA GTCCCATGCT CGGATGGTTT GCCGTGGCAG GAGCGCTCAT GCAGTTCATG
ATCGGCGTAA TCAATGAACG ACGTATCCGT GAACCTCTTC TTGCCGCAAA TCGAGGGTCT
CGAAACACGC AGGCCTATGC TGACAGCGTG CTTCGTAATG CCGAGGTTAT TGAGTCAATG
GGGATGCTCG ATCATATCCA CAACCGGTGG ATGAGACGTC AGCAGGATTT TCTGGTGCAA
CAGGCAAAAG CCTCCGATCA TGCGGGTACA AACGCAGCCC TCTCGAAGCT TGTGCAAAGC
CTTCTCGGCT CTCTTCTGCT TGGCGTTGGT TGCTGGCTGA CTCTCAAAGG TGAGCTTCAA
GGATCAGGCA TGATTGTATC CTCGATTCTC GGAGGCAGGG TGCTTTCGCC GCTCGTGCAG
ATCATCGGTA ACTGGCGGCA GGTTGAAGGA GCGTTCGAAG CCTTCACCCG ACTCGATCTG
ATGCTTAAGC AGTATCCTGT TCCGGAAAAA AGAATGGCGC TGCCGCCACC AACAGGATCG
CTTGTTGTCG ACAATCTCAT TGCCGGAGCA CCCGGCAGTA AGTCGCAGAT CCTGAAAGGG
ATCAGTTTCA GGCTGGCTCC CGGTGGTACA TTGGCCATTG TAGGGCCATC GGCATCAGGT
AAAACCACCC TTGCGCGACT GCTTGTCGGT ATCTGGCCGG CAATACAGGG CAAGGTAAGG
CTTGACGGCA ACGACATCTA CCAGTGGGAT AAAGAGGAAC TTGGCCAATA TATCGGGTAT
CTGCCTCAGA ACGTTGAACT GTTTGATGGA ACTATCGCTG AAAACATAGC CCGATTCGGT
GAACCGGATG AGGCAAAAGT TGAGGCTGCT TGCAGGATGG TTGGGCTTGA GCGCTTTATC
GAACAACTTC CGCAAGGGTA CGATACCCGG ATCGGCGACG ACGGCTCTTT TCTTTCAGGT
GGAGAGAGGC AGCGAGTTGC GCTGGCCCGA TCGGTATACG GTATGCCGAA GTTTATCGTG
CTCGATGAAC CCAACGCAAG CCTTGACGAA GCAGGTGATG CCGCCCTGCT CAGGGCTTTG
CAGTTGCTGA AAACCCTGGG CACAACCATC ATCGTCATAA CCCATCGATT GAATATTCTG
GGCGCAACAG AACATATGCT TGTGCTTGTT GATGGCCAGG TACAGCGTTT CGGCACCTCC
GAGGAGGTGC TTGCCGCCCT GCAGTCATCT CAGGATGCGC GACCTGCATC GAACGGGAAA
CCATAG
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| Protein sequence | MSEAIASLYP SFTNTFFFSL IVNVLVLAPS AYMMEVYDRV VNSRSHTTLL MLTILVIGSY
LLLEALEWVR RQVMHGAGLG LDAKLRDQVI GAMFTARLQS LSSGGTQALR DLKTVCDFLA
STAMLAIIDM PLALLVLVLI FMMSPMLGWF AVAGALMQFM IGVINERRIR EPLLAANRGS
RNTQAYADSV LRNAEVIESM GMLDHIHNRW MRRQQDFLVQ QAKASDHAGT NAALSKLVQS
LLGSLLLGVG CWLTLKGELQ GSGMIVSSIL GGRVLSPLVQ IIGNWRQVEG AFEAFTRLDL
MLKQYPVPEK RMALPPPTGS LVVDNLIAGA PGSKSQILKG ISFRLAPGGT LAIVGPSASG
KTTLARLLVG IWPAIQGKVR LDGNDIYQWD KEELGQYIGY LPQNVELFDG TIAENIARFG
EPDEAKVEAA CRMVGLERFI EQLPQGYDTR IGDDGSFLSG GERQRVALAR SVYGMPKFIV
LDEPNASLDE AGDAALLRAL QLLKTLGTTI IVITHRLNIL GATEHMLVLV DGQVQRFGTS
EEVLAALQSS QDARPASNGK P
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