| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1748 |
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| Symbol | |
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| ID | 4571110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 1975105 |
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| End bp | 1976820 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639766331 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_912189 |
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| Protein GI | 119357545 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.492562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCTC AATTTTTTAA GCGTAGCGCA CTCACCCGAC AGATCGGGGG ATTTCGAAAA
GAATTTCTCT GGGTCGGCAT GTTCAGCATG ATCGCCAATG TATTGATGCT TGCCCCAACC
ATCTATATGC TGCAGCTCTA TGGTCGTGTC ATGAAAAGTG GCAGCGAGAT GACCCTGTTT
CTGGTAACCC TCTTTCTGTT GCTTTTTTTT GCAGTGACGG CATGTGCTGA ATGGCTTCGT
TCGCGTCTGC TGGTGCGAGT AGGAGTCAGA CTTGATGAAG CGCTCAGCTC GCTGGTTTTT
AATGCGAGCT TTGAAGATTG CCTGAGCCGA TCCCGTCATA AAGCAGACGA GGCATTTCAG
GATTTAACCA CGCTTCGCCA GTTCATGACG GCAAATGGTA TTATTGCCTT TTTTGATACC
CCCTGGACGC CGGTATACAT AGCGGTTATT TTTCTGCTCA GCCCTTTTCT CGGATGGATC
TCTGTCGTGT TTGCCCTCAT TCAGCTTGCT GTAACCTGGC AGAGCAACAG GATAAGTGTT
CGGGAGATCG AAAGTGCTGC TGAGGCTGGC GCCGGGAGTT ATCGCTACGT ACAAAGCAAG
CTTCGCATGA TCGAGCCACT TTATGCAATG GGGATGCAGG GAAACCTCAG AAGACGTTGG
CTCAGGCTGC ACGATGCCTC GCTTCTCAAA AGCAGCGTTG CGCTTGACCG GCAGCATCGC
CAGCAGGCAT TAGCCAAGTT TGTGCGATAC AGCATGCAGT CGCTGACACT CGGAGCTGGA
GCCTTTCTGG TCATTGAAGG AAAACTGTCG GCAGGCTCGA TGATAGCGGC TAATGTTTTG
ATGTCGAGGG CTCTCCAGCC GCTCGATCTT GTGGTTGCAA CATGGAAGCC TTTTGTTCAG
GCTCGCGTTG CATTTTTACG TATTGAGAGA CTACTTGAAA AATTTTCCGA TTCCGGGCTT
CGTTCAGAGC ACGATCAGGA GCCTTTGGGA GAAATCAGGC TTAATGGGCT TACCGCCAGG
GTAGCGGGTC GAACGAAGCC TGTTCTGAAC GACCTTCATG CGCTCTTTCC TGCCGGAAAA
ATTACCGTGA TTCTCGGGCC GTCAGGCTCA GGAAAATCTA CGCTTGCCCG CTGTGTTTTG
GGCGTCTGGC CAGATAAGGA GGGCGATGTG CTGCTTGACG GCGATCCGAT AGAGAGCTGG
GAGCGGAAAG AGCTGGGGCC GCATGTCGGT TATCTGCCGC AGGATATTGA GTTGTTCGAT
GGATCAATTG CTGAAAACAT TGCCCGATTT GGCGAGCTGG ATTCTCCGAA AATCATTGAG
GCTGCAACAC GAACGGGTAT TCATGAGATG ATTCTTCGTT TTCCGCATGG TTACGACACC
CGGATCGGTG AGGACGGAGG ATTGCTTTCT GCGGGGCAAC GACAGCGGCT TGGACTTGCG
AGGGCAATGT ACGGCAATCC GAAGATTCTT GTGCTCGATG AACCCAATGC CAATCTTGAT
GACGCAGGAG AACGGGCACT CTTGCAGGCA CTCAGGGAGT TACGGGCAGC AGGTAAAACG
GTGATTCTTA TCACCCATCG TCCAGGTGTG ATTGCCGTCG CCGACCTGTT GGCCCTCATG
CAGGCAGGAA AGATCGTGCA GTGCGGACCA AGAGATGAGG TTATTGCATC ATTGCGCAAT
GAAAGCACAA AAGCGTCGGT AGTGCCGGCA GAATGA
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| Protein sequence | MNPQFFKRSA LTRQIGGFRK EFLWVGMFSM IANVLMLAPT IYMLQLYGRV MKSGSEMTLF
LVTLFLLLFF AVTACAEWLR SRLLVRVGVR LDEALSSLVF NASFEDCLSR SRHKADEAFQ
DLTTLRQFMT ANGIIAFFDT PWTPVYIAVI FLLSPFLGWI SVVFALIQLA VTWQSNRISV
REIESAAEAG AGSYRYVQSK LRMIEPLYAM GMQGNLRRRW LRLHDASLLK SSVALDRQHR
QQALAKFVRY SMQSLTLGAG AFLVIEGKLS AGSMIAANVL MSRALQPLDL VVATWKPFVQ
ARVAFLRIER LLEKFSDSGL RSEHDQEPLG EIRLNGLTAR VAGRTKPVLN DLHALFPAGK
ITVILGPSGS GKSTLARCVL GVWPDKEGDV LLDGDPIESW ERKELGPHVG YLPQDIELFD
GSIAENIARF GELDSPKIIE AATRTGIHEM ILRFPHGYDT RIGEDGGLLS AGQRQRLGLA
RAMYGNPKIL VLDEPNANLD DAGERALLQA LRELRAAGKT VILITHRPGV IAVADLLALM
QAGKIVQCGP RDEVIASLRN ESTKASVVPA E
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