Gene Cpha266_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1682 
Symbol 
ID4569894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1909724 
End bp1910956 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content48% 
IMG OID639766268 
Productextracellular ligand-binding receptor 
Protein accessionYP_912127 
Protein GI119357483 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.83641e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAG TATTACACTC TATCGTAGCA GTGCTGCTCG CAACATCGTT TTCCAATATC 
TCCCTGGCGG CTGATGTTAT CAGAATTGCC ATTACAGGGC CCTTTTCAGG CGGCTCCGCA
CCGATGGGCG TGTCCATGAG AAATGGCGCC AAACTGGCTT TTTCTAAAAT CAACCAGAAC
GGCGGCATTA TGATTGCCGG AAAAAAAACG AAAGTTGAGA TTATCGAACG CGACGATGAA
GGCAAAAACG ATCGCGGCGC ACTTATTGCC CAGGAAATAT CATCGATGAA TAACGTTTCG
GCTGTTATCG GAACGGTTAA CACCGGCGTA GCCGTCATGG GTGACAAGTA TTATGTTGAA
AAAAACATTG TCAAAATCAT TACGCCGGCA GCTGGCAGCG CATCAATGAC GCAATGGAAC
AAAACCGGTG TTAAAAATCT GCCGATTTTC CGTTTTGCTG CGCATGATGG CATCCAGGCA
CAGATGGTGG TAGAACAAGC ATTGAAACTT GGTATCAAAA AAGTCGCAAT ATTATATGAT
GCAACCAATT ATGGTGTTTC AGGACGTGAC GATCTGACCA GGCAGATCAA TAAACAGGGC
AATAAGCTTC AAGTGATGGC TCTCGAAAAA TTTGCCATCG GTGACAAGGA TATGACCGGT
CAGCTCATTA AAGCAAAGGC TGCCGGTGCC CAGGCCATCC TGATATGGGG AATCGGACCT
GAACTGGCAG CAGTTGCCGC CGGAAAGGAA AAACTTGGCT TCAAAGTACC GATGATTGGT
GGATGGACGC TCTCCATGAG CAATTTCATC GATACAGCCG GGCCCGCAGG CAATGGCGCT
CTTATGCCTC AAACATTTAT TGAAGACCCC TCCATAGCAA GAGCACGGCC CTTTATTCAG
GCATATCATA CAATGTACGG CGGCTCAAAA ATCCCTTCTC CGGTATCCGC TGCCCAGGGT
TATGACGCTG CCTTGCTGCT TGCTCAGGCC ATTCATGAAG CCGGATCATC CAACCCCTCA
AAAATCAGAG TTGCTCTCGA AAACCTTAAA GTCACCGTCA AAGGATCGAT TGCCGACTGG
AAAAAACCAT GGTCAACGTG GAACCCTGCC AATGTCGAGA GCCATGAAGC ATTCCGTCGA
TCAACAACAG TGATGGGTCA GGTGAAAAAC GGACGGGTGG TACTGGCCAA TTCTGCTGAC
AAGGCTGTTC TGGAAAGATC CGGCAGCAGG TAA
 
Protein sequence
MRKVLHSIVA VLLATSFSNI SLAADVIRIA ITGPFSGGSA PMGVSMRNGA KLAFSKINQN 
GGIMIAGKKT KVEIIERDDE GKNDRGALIA QEISSMNNVS AVIGTVNTGV AVMGDKYYVE
KNIVKIITPA AGSASMTQWN KTGVKNLPIF RFAAHDGIQA QMVVEQALKL GIKKVAILYD
ATNYGVSGRD DLTRQINKQG NKLQVMALEK FAIGDKDMTG QLIKAKAAGA QAILIWGIGP
ELAAVAAGKE KLGFKVPMIG GWTLSMSNFI DTAGPAGNGA LMPQTFIEDP SIARARPFIQ
AYHTMYGGSK IPSPVSAAQG YDAALLLAQA IHEAGSSNPS KIRVALENLK VTVKGSIADW
KKPWSTWNPA NVESHEAFRR STTVMGQVKN GRVVLANSAD KAVLERSGSR