| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1676 |
|---|
| Symbol | |
|---|
| ID | 4571056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | + |
|---|
| Start bp | 1904027 |
|---|
| End bp | 1905511 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639766262 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_912121 |
|---|
| Protein GI | 119357477 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACG GAAAAAGCCA TACTCAACCC GGTAATAACA TGCCCCTCTT TTGCCTTATC
CCCGGGCTGG GACTTCTCCG CCTGAAAAAA ACAGCTCAAG GTTTGTTCCT GCTCTTCTCT
TTCCTCGCCT ATCTCTTTAT TCTCGTCATG CGGTTTGACC TGGTTCTGTT CAGCTTCCGG
TCGATGCTCA CCGCACTGAC CATGCTCATC ATAACACCGG ATACACTCCG GGAAATCTTC
AGTCCGGAGA TCCTTGAATT CTGGATTGGC TCCTGCTGTC TTGTCGCCGT TCCCATGCTT
CTTTTTTTCA TCTCACTGCG ATCCTGCAAA AAAACGGTTT CAGAAAAAAA CAAGCCGACC
AGAGAAGAAT CAAGCCTCGG CAAAATAAGT CTTCAGGCTT TCATGCGTCA ATCAATCGCG
CTGTATGCAT CGGCCATCAT TTTTGTCCTC TACTCGGTAG CATTCCTTGC GCCGTTCATT
GCACCATTCA GCCCCTATGA TCAGCAGGAC TTTCTTGTCA CTGCCTATCA ACCACCCATG
ACCCGTCTGC AGGCGCTGAT ACTTCAGCAG CCGAAACACC TCGTCATTCC GATACAAAAG
GGCTCAGACA AAGCAACAGA ACTGAGTAAT TCCTTTATCA GCGACTATCA GAAACTCACC
TCACGAAACG AACCCCACGC GCTGAAATTC GTCAACAGCT ATAACGTTCA GTGCGAAACG
GTGACATACG TCCAGGGAAT ACGGACAAAA ACCATTCCGA TTGCCGAACT CGCAGCCGGA
AAAGATGCTA CGGCAAAACT TGCCGTTACC CGAACGTTCA TACTCGGTAC CGACCAGTAC
GGACGCGACA TTCTCAGCCG AGTTATCTAT GGCTCGAGAA TATCACTCTC CATCGGGTTT
CTTGTCGTCC TTATCTCCGT AACGCTCGGA ACCATTATCG GTGTCTCATC GGGCTATTTC
GGCGGCTGGA TCGATGCCAT ACTGATGCGA ATTGTCGATG TACTTATAGC CTTCCCGGCA
CTTTTTCTCA TACTTATCAT CATCGCCGCA TTCGGAAACT CCATCTACCT TATTGTGATT
ACGCTTTCCT TCACCGGATG GATGGGTGTG GCAAGAATTG TCAGAAGCCA GGTGCTCTCG
CTCAAAGAAC AGGAGTTCAT TCTGGCCGCA AAATCGCTCG GGCTTTCTAA TATGAGAATC
ATTTTCCGCC ACCTTGCGCC CAACACGCTG ACGCCGGTCA TTATCGCGGC AACACTCCGT
ATAGGCAGCA TCATTCTTAC CGAAGCAGGA CTATCGTTTC TCGGGCTCGG CGTTCAGCCG
CCTACAGCAA GCTGGGGCAA CATCATCAAC GAAGGACGCG ACAGCCTTTT GAACCACTGG
TGGATATCAA CATTTCCAGG CATCGCCATT CTCACCACGG TGGTATGCTT TAACCTGATC
GGTGACGGCG TGCGTGACGC TCTCGATCCG AGAATGAGAG GATAA
|
|---|
| Protein sequence | MNNGKSHTQP GNNMPLFCLI PGLGLLRLKK TAQGLFLLFS FLAYLFILVM RFDLVLFSFR
SMLTALTMLI ITPDTLREIF SPEILEFWIG SCCLVAVPML LFFISLRSCK KTVSEKNKPT
REESSLGKIS LQAFMRQSIA LYASAIIFVL YSVAFLAPFI APFSPYDQQD FLVTAYQPPM
TRLQALILQQ PKHLVIPIQK GSDKATELSN SFISDYQKLT SRNEPHALKF VNSYNVQCET
VTYVQGIRTK TIPIAELAAG KDATAKLAVT RTFILGTDQY GRDILSRVIY GSRISLSIGF
LVVLISVTLG TIIGVSSGYF GGWIDAILMR IVDVLIAFPA LFLILIIIAA FGNSIYLIVI
TLSFTGWMGV ARIVRSQVLS LKEQEFILAA KSLGLSNMRI IFRHLAPNTL TPVIIAATLR
IGSIILTEAG LSFLGLGVQP PTASWGNIIN EGRDSLLNHW WISTFPGIAI LTTVVCFNLI
GDGVRDALDP RMRG
|
|---|
| |