| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1633 |
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| Symbol | |
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| ID | 4568578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | + |
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| Start bp | 1861241 |
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| End bp | 1862293 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639766217 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_912078 |
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| Protein GI | 119357434 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.784854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAATC AGCCGATAAA AAACGAATCC CTTGACGTTC AGGAACTGCC CCCGGAACCC
AAAAAGCTTG CTATTCAGGT AAGTCGCGTA CAGATCCCGA TGCGCATCGA CAAATACCTC
ACCCAGCAGG TGGAAAATGC CACCCGCAAC AAGGTGCAGG AAGCCATCAC TGAAGGGCGG
GTACTGGTAA ACGGCAAGCC CGTAAAATCA AATTACAAAA TCAAGTCATG CGACCTGATT
CAGATAACCT TTCTGCGTCC TCCTGCGCCT GAAATGGCTC CCGAAAATAT TCCGATCGAT
ATTATTTATG AAGACGCAGA CCTCATGGTT GTCAACAAGG AGGCGGGAAT GGTTGTCCAT
CCTGCATTTG GCAACTGGAC CGGAACGCTT GCCAATGCGA TTCTGCATCA TATCGGCAAC
GATACCGGAG AGCTCGACTG CTCCCTTCAG CGACCCGGCA TTGTACACCG GCTCGACAAA
GATACCTCGG GTCTGATTAT CATTGCAAAA AATCCTCTTG CCTTGCAGCG CCTTGCCCGC
CAGTTTGCCC AGCGACAGGT TGAAAAAATT TACCACGCTC TGGTGTGGGG GGTACCGGAA
CCGGCTTCAG GCACCATAAA AACCAATATC GGGCGATCAA AAAAAAACCG GAAGGTCATG
ACCACTTATC CCTTTGAAGG TATTGACGGC AAACATGCGA TAACCGACTA CGCCGTCATT
GAAGACTTAC GATACTTTTC GCTTGTGTCA ATCAAACTCC ATACAGGGAG AACACATCAG
ATACGGGTAC ATCTGCAACA TCTCGGCCAC CCAATCCTCG GGGATACTGT TTATGGGGGC
GCCTCCATAC GCACGCTCCC GTTCAGCAAA AGCGAGAGTT TCATTAAAAA CCTGCTTGAA
ATAATACCGC GCCAGGCGCT CCATGCCCAG ACGCTGCGCT TCACCCAGCC ATTAACGCAT
GAACCGCTCT CCTTTACGGC TCCCCTGCCC GGAGACATGA TAAATGCCTG CCTGAAAATA
AAAACGCTCC TCAAGGATGC ATTCCCTCTA TAA
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| Protein sequence | MLNQPIKNES LDVQELPPEP KKLAIQVSRV QIPMRIDKYL TQQVENATRN KVQEAITEGR
VLVNGKPVKS NYKIKSCDLI QITFLRPPAP EMAPENIPID IIYEDADLMV VNKEAGMVVH
PAFGNWTGTL ANAILHHIGN DTGELDCSLQ RPGIVHRLDK DTSGLIIIAK NPLALQRLAR
QFAQRQVEKI YHALVWGVPE PASGTIKTNI GRSKKNRKVM TTYPFEGIDG KHAITDYAVI
EDLRYFSLVS IKLHTGRTHQ IRVHLQHLGH PILGDTVYGG ASIRTLPFSK SESFIKNLLE
IIPRQALHAQ TLRFTQPLTH EPLSFTAPLP GDMINACLKI KTLLKDAFPL
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