Gene Cpha266_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1580 
Symbol 
ID4569762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1796058 
End bp1796933 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content56% 
IMG OID639766162 
Productheat shock protein HtpX 
Protein accessionYP_912026 
Protein GI119357382 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.35294e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGGG TGGTTCTTTT TTTGTTTACC AACCTTGCGG TGATGCTGGT GTTGTCGGTC 
AGTGCCCGTG TTCTGGGCGT AGACCGATTT TTGACCGGCA ACGGTCTGGA TATGGGCATG
CTGCTTCTGT TTGCTGCTTT AATCGGTTTT GGCGGATCCT TTATTTCTCT TCTGATGTCC
AAAACCATGG CGAAATGGAG TACCGGCGCA CGGGTTATCC AGCAACCCGC CAACCAGAAC
GAGGTATGGC TCGTTGATAC CGTGAGTCAG CTTTCCAAAA AAGCCGGTTT GGCGATGCCC
GAGGTGGCCA TCTACGACGG TGCTCCGAAT GCCTTCGCCA CAGGCCCCAG CAAGTCGAGA
TCGCTGGTGG CGGTCTCGAC CGGACTGTTG CAGAGCATGG ATCGAAAACA GGTGGAAGCC
GTGTTGGCTC ACGAGGTCGC CCACATCGAT AACGGCGACA TGGTTACCTT GACGCTGATA
CAGGGTGTGC TCAATACCTT CGTGATTTTT CTGTCGCGCG TCATTGCCTA TGCTATTGAC
AGCTTTCTTC GCAGCGACGA CGACGAGTCC GGCAGTCCGG GTATCGGCTA CTGGATCAGC
AGCATTATTT TTGAAATCAT GTTCGGCATT CTGGCAAGCG TCGTCGTCAT GTACTTTTCT
CGCAAGCGTG AGTATCGGGC CGACGCGGGA GCTGCTGTGC TGTTGGGCGA CCGGCGCCCG
ATGATCGACG CCCTGCGAGC GCTGGGAGGT CTTCAGGCCG GCCAGTTGCC GAAGGAAATG
GCTGCCAGCG GGATTGCGGG TGGCGGTATG ATGGCTCTTT TCAGCAGTCA CCCGCCCCTT
GAATCGCGGA TTGCAGCGCT GGAATCGGCA CGCTGA
 
Protein sequence
MKRVVLFLFT NLAVMLVLSV SARVLGVDRF LTGNGLDMGM LLLFAALIGF GGSFISLLMS 
KTMAKWSTGA RVIQQPANQN EVWLVDTVSQ LSKKAGLAMP EVAIYDGAPN AFATGPSKSR
SLVAVSTGLL QSMDRKQVEA VLAHEVAHID NGDMVTLTLI QGVLNTFVIF LSRVIAYAID
SFLRSDDDES GSPGIGYWIS SIIFEIMFGI LASVVVMYFS RKREYRADAG AAVLLGDRRP
MIDALRALGG LQAGQLPKEM AASGIAGGGM MALFSSHPPL ESRIAALESA R