Gene Cpha266_1532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1532 
Symbol 
ID4569582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand+ 
Start bp1740426 
End bp1741046 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content49% 
IMG OID639766114 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_911978 
Protein GI119357334 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACCTG CCAAACCATT TCTCTGTGTT ATCACCGATG AGCAATGCTC ATCACCCGTC 
GATCTGGCCT TGATGGCACT CGAAGGCGGG GCTGAAATGA TACAGCTTCG CCACAAATCA 
GCCTCAGGAA AACAACTTTT TCAATGGGCT CTGGATATTC AGCGGCTTTG TCGGATCCAT 
CATGCTCAAT TTATTGTCAA TGACCGGGTT GATATCGCTC TTGCCATGAA TGCGGACGGA 
GTACATCTGG GTCAGCAGGA TCTTCAGCCC GGAGAGGCAA GAAAACTTCT TGGCACCGAC 
AAGATAATAG GTGTTTCCAC CTCATCTCTT ACGGAGGCTT TAAATGCGGA GCGGGCTGGC 
GCCGACTACA TTGGATTCGG CCATATTTTT CAAACCGGAT CAAAAAACAA ACTATCCGCG 
CCCCTTGGAT CGGCGGCGAT CAGTGCTGTC GTTCAACGGA TTTCCATTCC TCTTGTTGCC 
ATTGGAGGGA TCAATAAGAT GAATATGATG GAAACAATAG CAGCAGGAGC ATCCGGAATC 
GCAATGATTG CCGCAATCAG CAGAACAGCC GACCCTGAAG GGGCAACCCG TGCAATTACA 
GAACTTCTGA AAGGTCATTG A
 
Protein sequence
MIPAKPFLCV ITDEQCSSPV DLALMALEGG AEMIQLRHKS ASGKQLFQWA LDIQRLCRIH 
HAQFIVNDRV DIALAMNADG VHLGQQDLQP GEARKLLGTD KIIGVSTSSL TEALNAERAG 
ADYIGFGHIF QTGSKNKLSA PLGSAAISAV VQRISIPLVA IGGINKMNMM ETIAAGASGI 
AMIAAISRTA DPEGATRAIT ELLKGH