Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1525 |
Symbol | |
ID | 4569575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 1732576 |
End bp | 1733925 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639766107 |
Product | signal recognition particle subunit FFH/SRP54 (srp54) |
Protein accession | YP_911971 |
Protein GI | 119357327 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000514832 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGATA ATTTAAGTGA TAAATTAGAG GCCACCTTTA AGAAACTTGC AGGGCAGGCG ACGATCAATG AGATCAATAT TGGTATTGCG ATGCGCGATA TCAAGCGCGC TCTGCTCAAT GCTGACGTGA ATTACAAGGT AGCAAAGAAG CTGGTTGACG ATATCAGGGA AAAATCACTT GGCGAGCAGG TACTCAAGAG CGTTTCTCCT GCCCAGATGA TTGTCAAGAT TGTCAATGAC GAGTTGACCG ATCTTATGGG AGGCGAACAT CAGCCGTTGA ACCTCTCCCC CAAAAAGTTG CCCGCCATTA TCATGGTTGC GGGTTTACAG GGTTCCGGAA AAACGACGTT CTGCGCAAAG CTGGCCAAGC GTCTCAAAAA GAACGGGAAA AACCCCATGC TGGTAGCTGC CGACGTCTAT CGTCCAGCCG CTGTCGACCA GCTCAGGACT CTCGGCGAAC AGGTTGATGT ACCCGTTTTT TCCATAGATG AGCAGGATGC GATGAAGGCC GCCGTGAAGG GTCTTGAAGC AGCCCGTCTT GCGGCAAAGG ATGTCGTTAT CATCGATACG GCAGGCCGTT TGCAGATAGA TGAGAAAATG ATGGCGGAGG CAGAGGCATT GAAACATGCG CTCAAGCCCG ATGAGCTGTT GTTTGTCGTT GATTCCATGA TGGGTCAGGA AGCTGTCAAT ACGGCCAAAG CTTTTAACGA CAGGCTCGAT TTTGACGGCG TTGTGCTAAC CAAACTCGAC GGAGATGCAC GAGGCGGTGC GGCGCTTTCC ATACGCCAGG TTGTCGAAAA GCCGATAAAA TTCATCAGTG TTGGTGAAAA GGTCGATGAT CTCGATCTCT TTTATCCCGA CCGTATGGCC CAGAGAATTC TCGGTATGGG TGATATTGTC AGTTTTGTTG AAAAAGCGCA GGAAACGCTG GATCTTGAGA AGACCCTCGA GATGCAGAAG AAACTGATGA AAAACGAGTT TGATCTCAAC GACTTTTTCG ATCAGCTCCA GCAGCTTAAA AAGATGGGCT CGATTCAGGG ACTCATTTCC ATGGTGCCGG GATTGAATAA AATGGTTCCG AAACAGGAAA TTGAAAATCT TGATTTCAAG CCGATTGAGG CGATGATCAA CTCCATGACA AAACAGGAAA AAACAAATCC TGAAATAATC AATGGCAGTC GGAGGCAGAG AATTGCAAAG GGAAGCGGTA CCAGGGTTCA GGAAGTGAAC ATGCTGCTCA AGCAGTTCGG GGAGATGAAA AAGATGATGC GTTCGGTAAC GAAGCTTTCG CAATCAGGCA GAAAAATCAC CTCACAGAAT CTTGCGCTCG ACAAGTTTCT AAAACGTTAA
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Protein sequence | MFDNLSDKLE ATFKKLAGQA TINEINIGIA MRDIKRALLN ADVNYKVAKK LVDDIREKSL GEQVLKSVSP AQMIVKIVND ELTDLMGGEH QPLNLSPKKL PAIIMVAGLQ GSGKTTFCAK LAKRLKKNGK NPMLVAADVY RPAAVDQLRT LGEQVDVPVF SIDEQDAMKA AVKGLEAARL AAKDVVIIDT AGRLQIDEKM MAEAEALKHA LKPDELLFVV DSMMGQEAVN TAKAFNDRLD FDGVVLTKLD GDARGGAALS IRQVVEKPIK FISVGEKVDD LDLFYPDRMA QRILGMGDIV SFVEKAQETL DLEKTLEMQK KLMKNEFDLN DFFDQLQQLK KMGSIQGLIS MVPGLNKMVP KQEIENLDFK PIEAMINSMT KQEKTNPEII NGSRRQRIAK GSGTRVQEVN MLLKQFGEMK KMMRSVTKLS QSGRKITSQN LALDKFLKR
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