Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1519 |
Symbol | |
ID | 4569569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 1727075 |
End bp | 1728907 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639766101 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_911965 |
Protein GI | 119357321 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.924461 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACTCA TCAATTCCGA TTTCAACACG CTGCCTGAAC TTTTCTCATC CATTTTTACG CATTACAAAG GGCAAAGTTC AACGTTTCCC CTTGCAAGGA AAATCAACGG CGCTTATGAA CCGATCTCCT ACGATTTGCT GCAGGAGGAT GTCAGACATT GTGCTGCATA TCTCAAAGAA CATGGAATAG CCGCAAAAGA TCGCGTGGCA ATTCTTTCTG AAAACAGACC CGGCTGGTAT ATGGCTGATA TGGCCATACT GATGCTTGGC GCCGTTACGG TACCTCTTTA CCCTTCGCTT CCCCCGAACC AGATAGAGTA CATTCTCCGC AACTGCGGGG CAAAAGGAAT CATTGTATCA AACATGCTGC AGCTTGGCAA AATCATCTCT ATCTGGCAGA AACTGCCGGA TCTGAGCCTG GTTATTGTCA TGAACCGGCT TGAAGAAACC ATTGATGAAG TCGTTGATCT CAATCAGGTA AAAGACGAGG GGAAAACCAT TCTCGAAAAA AAACCATGGC TGCTTGATGG AATAGATGTT GAACCTGACG ATATCGCCAC ACTGATTTAC ACATCGGGAA CAACCGGACT TCCTAAAGGG GTCATGCTGA CGCACAGGAA CCTCTGTGAA AATGTCAAGT CGTGCTCCAC CGTTATCCGA CTCGACGAAA CCGATCGAAG CCTTTCATTT CTCCCGCTTT CCCACGCTTA CGAACGGACG GGAGGCTACT ATCTGCTGTT TTCATGCGGT GCGGCAATCT ATCTTGCTGA AAGCGTCGAA ACCGTCTCAC TGAATATCGC TGAAGCCCGT CCGACGATCA TCTTCACCGT TCCTCGCCTG TTCGACAGAA TCAAGGCCAA CACGCTCAAA CAGATCGGCA ATGAAAGCGC TATAAAACAA AAGATATTTT TCTGGGCTCT GCATACCGGC GAAGAGTTCC ACCGCCAGAT GAATGCAAAA GGCAAAGCCG CACTCGCAGT TTCCATGCAG CACTCTCTTG CCGATAAACT GGTTTATGCA AAAATCAGAA AAAAATTCGG CGGAAAACTT CGATACTTCG TTTCGGGAGG AGCTGCCCTG CCGCAGAAAG TCGGAGAGTT TTTCCAGGCA TTGAGCATCA ATATCCTTGA AGGATACGGG CTTACTGAAA CATCGCCCGT CACAAACGTC AACAGGCCAG AGAAGATCAA GCTTGGAACG GTTGGACCTG CTGTCAATAA CGTTCAGATA AGAATTGCTG ATGACGGCGA GATTCTTATG AAAGGTCCCA ATATCATGAA AGGCTACTGG CAGGATGAAG ATGCTACGCG AGAGGTTATT AAGGATGGCT GGTTTTACAG CGGGGATATT GGAGAGATTG ATCGTGACGG GTATCTGAAA ATCACCGATC GAAAAAAACA CATCATCGTC ACCTCCGGCG GAAAGAATAT CGCTCCCCAG CCTATTGAAA ACCTTATTTC GGAAAGCCCC TATGTAGATC AGGTGATTGT GATCGGCGAA AAGCGACCAT TTCTTATCGC GCTGATTGTT CCTGATTTCA GTAAACTAAT GGAATACGCC AAAGAAAACT CCATCTCGGC TACAACAAAC AAGGCGCTGA TTGAGAATAA AAATATTCAG CAGATTTATG AAAAGCTCAT GCGAACCATT TCCCGTCAAC TGGCGACCCA TGAAAAAGTT CGCAAGTTTC TGCTTGTTGA TGAAGCATTC AGCATTGAGA ACGGTGACAT GACTCCGACC ATGAAACTGA AACGAAAGAC TATAACCAGC AGATATGCTG CTGAAATTGA CAAGGTATAC CAGGCGCTGA ACATGGTGTA CAATACAGAA TAA
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Protein sequence | MGLINSDFNT LPELFSSIFT HYKGQSSTFP LARKINGAYE PISYDLLQED VRHCAAYLKE HGIAAKDRVA ILSENRPGWY MADMAILMLG AVTVPLYPSL PPNQIEYILR NCGAKGIIVS NMLQLGKIIS IWQKLPDLSL VIVMNRLEET IDEVVDLNQV KDEGKTILEK KPWLLDGIDV EPDDIATLIY TSGTTGLPKG VMLTHRNLCE NVKSCSTVIR LDETDRSLSF LPLSHAYERT GGYYLLFSCG AAIYLAESVE TVSLNIAEAR PTIIFTVPRL FDRIKANTLK QIGNESAIKQ KIFFWALHTG EEFHRQMNAK GKAALAVSMQ HSLADKLVYA KIRKKFGGKL RYFVSGGAAL PQKVGEFFQA LSINILEGYG LTETSPVTNV NRPEKIKLGT VGPAVNNVQI RIADDGEILM KGPNIMKGYW QDEDATREVI KDGWFYSGDI GEIDRDGYLK ITDRKKHIIV TSGGKNIAPQ PIENLISESP YVDQVIVIGE KRPFLIALIV PDFSKLMEYA KENSISATTN KALIENKNIQ QIYEKLMRTI SRQLATHEKV RKFLLVDEAF SIENGDMTPT MKLKRKTITS RYAAEIDKVY QALNMVYNTE
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