Gene Cpha266_1432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1432 
Symbol 
ID4568993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand- 
Start bp1634549 
End bp1635193 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content53% 
IMG OID639766018 
ProductCRISPR-associated Cas4 family protein 
Protein accessionYP_911884 
Protein GI119357240 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.343364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGATG AATCCGACTT CATAGCGCTT TCGGCATTGC AGCATTTCGT GTATTGCCCC 
CGGCAGTGTG CGCTAATCCA TATCGAACAG GTATGGGCTG AAAACAGCTA CACTGCCGAA 
GGCCGGGAGA TGCATGAACG GGTTGACGAC GGGGAAACGT CGTACCGTCC GGGTGTTCGA 
ACCACAAGGA GCGTCCCGCT ACGGAGTGCT ATGCTTGGCG CTTCGGGTAT AGCTGACGTT 
GTAGAATGGC ATAAGCGAAA TGGCCGTGAG GAGCCGTTCC CGATTGAGTA CAAGCGAGGC 
CGGCAGAAAA AGCATGATGC CGACAAGGTT CAGCTCTGTG CCCAAGCCAT CTGTCTTGAA 
GAGATGCTGG GCATAGCCAT TCCTTCTGGC GCTTTGTTCT ATGGCCAGAC AAAACGCAGG 
TTCGAGGTGG TTTTCGATGC TATGCTTCGA GAGAAAACCG CTGCAACTGC AGAATGCGTT 
CATGAACTGT TCAGGAATGG CGTTACTCCC CTGCCGGAAC CCGGCCCGAA ATGTAACCAG 
TGCTCGTTAC AGGAGCTCTG TCTGCCTGAG GTCGTTGTCC ATAGCCGGTC AGCTAAAAAT 
TATGTGCACA AACTGCTTCG TGAACTCTCG GAGGATGAAA TTTGA
 
Protein sequence
MYDESDFIAL SALQHFVYCP RQCALIHIEQ VWAENSYTAE GREMHERVDD GETSYRPGVR 
TTRSVPLRSA MLGASGIADV VEWHKRNGRE EPFPIEYKRG RQKKHDADKV QLCAQAICLE 
EMLGIAIPSG ALFYGQTKRR FEVVFDAMLR EKTAATAECV HELFRNGVTP LPEPGPKCNQ 
CSLQELCLPE VVVHSRSAKN YVHKLLRELS EDEI