Gene Cpha266_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1421 
Symbol 
ID4568506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1614836 
End bp1615459 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content50% 
IMG OID639766007 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_911873 
Protein GI119357229 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGATC AGCATGTTCT GTTTATGTTT TTTGTTTCCT CGGTCGTTCT TTCACTTTCG 
CCGGGGCCGG ATAATCTCTT TGTTATGGCT CAGTCGGCCC GGAACGGTCG GCTTGCCGGG
ATGATGGTTA CGCTTGGCTT GTGTACCGGA CTTGTTTTGC ATACACTTGC CGTTGCGTTC
GGGCTTGCGG CTCTTGTGGC CGCATCGGCT GTTGCTTTTA CCGTGCTTAA ATTCGCAGGA
GCAGCTTACC TTCTTTTTCT TGCATGGAAG GCGTTTCATG CCGATGTCGA AAAGGATTCT
TCTGACGTTT CGCAGGTTGA GCGGGGGAAA CTCTACAGGC GGGGGATTGT TATGAATATT
TCCAACCCGA AGGTGTCGCT TTTTTTTCTT GCTTTTCTGC CGCAGTTTGC CGATCCGAAA
AATGGGCCTC TGGTGCCGCA ACTTCTGTTT CTCGGCGCGA TTTTTATTGT GGCTGCACTG
CTTGTTTTTT CGCTGCTCTT TTTTGTTGCT GGCGGAGCAG GGGCTCGCTT TCGTCGTTCC
GCGAAAGCCC GCAGGGTAGT GAACAGGATT GCCGGAACGA TTTTTGCTGG TTTTGCCTTA
AAACTTCTTT TTACTGAACG ATAG
 
Protein sequence
MIDQHVLFMF FVSSVVLSLS PGPDNLFVMA QSARNGRLAG MMVTLGLCTG LVLHTLAVAF 
GLAALVAASA VAFTVLKFAG AAYLLFLAWK AFHADVEKDS SDVSQVERGK LYRRGIVMNI
SNPKVSLFFL AFLPQFADPK NGPLVPQLLF LGAIFIVAAL LVFSLLFFVA GGAGARFRRS
AKARRVVNRI AGTIFAGFAL KLLFTER