Gene Cpha266_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1243 
Symbol 
ID4570261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1410120 
End bp1410854 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content53% 
IMG OID639765834 
ProductABC transporter related 
Protein accessionYP_911700 
Protein GI119357056 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTCTAC AAGGCATAGT GATCGAAGGG CTCAAAAAAC AATATGGAAG CGGCGAAACC 
CTTGTCGATG CCCTTAAGGG GGTTGATATG CAGGTTGCGC CCGGCGAGGT TGTGGGGCTT
ATCGGCCCCT CAGGGTCCGG TAAAAGCACC TTGCTGAAAT GCCTTGGGGC GGTTATCGAG
CCTTCGTCAG GCAGAATGAC TCTGGGGGAT CTGGTGATTT TTGATGGTCA ATGGAAAATT
CCGGATCTTC GGGCGCTTCG CCGCGATAAA ATAGGCTTTG TGTTTCAGGC GCCCTATCTG
ATTCCCTTTC TTGATGTGAC CGATAATGTC GCGTTGCTTC CGATGCTCGC AGGTGAACGA
AACAGTGAGG CCCGCAGCCG GGCGATGGAG CTTCTTGAAG CTCTCGACAT AGGGCATCGG
TCAAAAGCCA TGCCCTCGCA GCTCTCGGGT GGTGAGCAGC AGCGCGTGGC TATTGCCAGG
GCGCTTATCA ATCGTCCGCC GGTGATTCTC GCCGATGAAC CGACAGCTCC GCTCGACAGT
CATCGTGCGC TTGCGGTGAT CGGCATCCTT AATGAGATGG CCCGTCAGTA TGAGACGGCT
ATTATCATCG TAACCCATGA TGAAAAAATC ATACCTACCT TTAAGCGGAT CTATCAAATT
CGCGATGGTC GCACTCATGA AGAGGTTGGT GAGGGAAAAT CTCCTTCGGA ACAGCTTAAA
ACCTATTTGG AATGA
 
Protein sequence
MSLQGIVIEG LKKQYGSGET LVDALKGVDM QVAPGEVVGL IGPSGSGKST LLKCLGAVIE 
PSSGRMTLGD LVIFDGQWKI PDLRALRRDK IGFVFQAPYL IPFLDVTDNV ALLPMLAGER
NSEARSRAME LLEALDIGHR SKAMPSQLSG GEQQRVAIAR ALINRPPVIL ADEPTAPLDS
HRALAVIGIL NEMARQYETA IIIVTHDEKI IPTFKRIYQI RDGRTHEEVG EGKSPSEQLK
TYLE