Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1169 |
Symbol | ksgA |
ID | 4570746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 1319232 |
End bp | 1320041 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639765762 |
Product | dimethyladenosine transferase |
Protein accession | YP_911630 |
Protein GI | 119356986 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.013755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAAAAG TTGAATATAA GCATACAGAA ATAGCGGTAA AAAAAAAACT GGGTCAAAAC TTTCTCACAG ACCGAAATAT CACTCGTAAA ATAGTTACGG AATCCGAAAC GAACCCTGAC GATACTATTC TGGAGATAGG ACCGGGATTC GGGGCATTGA CGCGGGAAAT CAGTACCATT ACTCCGCGCT TCACTGTTGT TGAAAAAGAC CCGAAGCTTG CCTCATTCAT CCGTAACGAG TACCCTGAAC TTACGGTTAT AGAGGGAGAT TTTCTCACTG TCGACCTTAA AAAAATCGCA GGCGAAAAAC CGCTCAGGGT TCTTGGCAAT ATACCCTATG CCATTACCAG CCCGATTCTC TTTAAACTGC TTGAAAACCG TCATATTTTA TTATCGGCAA CCCTGATGAT GCAACATGAA GTTGCCTTGA GAATAACCGC AAAGCCCCGC ACAAAAGATT ATGGCATACT TGCCGTACAG ATGCAGGCGT TCTGTGAAAC CAAATATCTC TTTCGTGTCG GACGAAAGGT TTTTCGGCCT CAGCCTGGAG TTGACAGCGC AGTCATCAGC ATGAAACCTA AAGTCAACGA TCCGGTCTCT GACAGAGAAG GATTCAGCCG GTTCGTACGC TGCGCATTCC ATCAGAGAAG AAAAACCCTG CAAAACAATC TGAAAAAAAC CTATGAACTT GACCGGGTGG AGAGTTCGGT GCTGAAACAG CGGGCCGAAG AGCTTTCAAT TGATGAATTT TTCCGGCTCT TCGAACAAAT CAGACCCCTT ATGGTCTCAT CGGCTGATCC GGAAAGCTGA
|
Protein sequence | MIKVEYKHTE IAVKKKLGQN FLTDRNITRK IVTESETNPD DTILEIGPGF GALTREISTI TPRFTVVEKD PKLASFIRNE YPELTVIEGD FLTVDLKKIA GEKPLRVLGN IPYAITSPIL FKLLENRHIL LSATLMMQHE VALRITAKPR TKDYGILAVQ MQAFCETKYL FRVGRKVFRP QPGVDSAVIS MKPKVNDPVS DREGFSRFVR CAFHQRRKTL QNNLKKTYEL DRVESSVLKQ RAEELSIDEF FRLFEQIRPL MVSSADPES
|
| |