Gene Cpha266_1162 details

Gene Information

• Locus tag: Cpha266_1162
• ID: 4570739
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium phaeobacteroides DSM 266
• Kingdom: Bacteria
• Replicon accession: NC_008639
• Strand: +
• Start bp: 1309213
• End bp: 1309674
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 639765755
• Product: UspA domain-containing protein
• Protein accession: YP_911623
• Protein GI: 119356979
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0589] Universal stress protein UspA and related nucleotide-binding proteins

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0534961
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCAGAA TACAAACCAT TCTCTGTCCG GTTGATTTTT CAGATGCGTC AACGAAAGCG 
GTACGGTATG CGCAGGAGTT TGCTGTAGGT ATGGGGGCGG CGATCTCTCT TTTGAATGTG 
GTCGAGCCTC GTCCCATGGC GATTGATATA TCTCTTGAAT ATGTTCCTCT TGAAGAGGAT 
CTTGCCAAGG CGGCGGAAGG TGATCTTGAT CTCCTGCGTC AGGAATTGAT GAAAGCGGGA 
GTTGTTGTCA ATTGTTCTGT TGAAATCGGC AACCCGTCAG AAGTTATTCT TGAACAAGCT 
GATCATCTTG ATGTCAATCT TATTATCATG GGTTCGCACG GCAAGAAGGG ATTGAGCCGC 
CTTATTATGG GAAGTGTTGC TGAAACAGTT GTGCGCAAGG CGAACTGTCC GGTTCTTATT 
GTGAAGAGTA ATGAAAAGGA GTTTATCGGT TCTACTGAAT AA 

 

Protein sequence

MFRIQTILCP VDFSDASTKA VRYAQEFAVG MGAAISLLNV VEPRPMAIDI SLEYVPLEED 
LAKAAEGDLD LLRQELMKAG VVVNCSVEIG NPSEVILEQA DHLDVNLIIM GSHGKKGLSR 
LIMGSVAETV VRKANCPVLI VKSNEKEFIG STE