Gene Cpha266_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1115 
Symbol 
ID4570155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1260809 
End bp1262758 
Gene Length1950 bp 
Protein Length649 aa 
Translation table11 
GC content48% 
IMG OID639765711 
ProductTonB-dependent receptor 
Protein accessionYP_911579 
Protein GI119356935 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4206] Outer membrane cobalamin receptor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.95294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAA AAATTTTTCT TATCGTGATG GCCGGGCTGC TGTGCAGCAA AGGACTTCTT 
GCCGAAGAGA TGGTAAAAAG CTATACCGGG GATGAGGTTG TGGTGACTTC AAGCCGTGTA
GAGGAGTCTA AAAAAAATGT AACCTCCAGT ATTACCGTTA TTGGCAGGGA AGAGATCGAA
CAATCATCTG CTCACGATCT CGGTGAATTG CTTGCGGAAA AAAGCATTGG GCATATCCAG
AAATATCCAG GCACCATGAC ATCGGTTGGT ATCAGGGGAT TCAGGACCGA GACGCATGGT
AACGATCTTA TGGGCAAGGT GCTTGTGCTT CTCAATGGCC GGCGCGCGGG TACCGGCAAC
CTTGCCAAAA TTTCGACGGG GAATATAGAA CGTATTGAGA TTATTCGTGG CCCGGCTGCA
GTGCAATACG GTTCTGCTGC CATAGGAGGT ATCGTTAACG TTATCACCTC AAGGGGAAAC
GGAAAACCGG GATTGTTTTT TAAACAGGAA TTCGGGAGCA ATGATTACAC CCGGACGACC
ATGGGGGCCG ATGGCAAATC AGCCGGGGTT GATTATTCGG GCAGTGTTTC TTTTTCTGAT
GCGGGTGATT ATAAGACCGG TGCAGGAGAT GAATACAAAA ATACCGGTTA CAGTGACAGG
ACGGTCGGAA ATGTGAATAT CGGTTACGAG TTTCTGCCCC ATCACAGAAT AGGCGTGATA
TACAATTATT TCGATGTCAG AAAAGCAGGT TCCCCATCAT ATCTGAGTCA GAATGATTTG
GATGCATATA CCAGTCAGAA AGCATATTCT ACCGATTTTA TCTATGAGGG CTCTACCGGG
AACCGGCGTT TTTCATGGAT GGCTCGTTAT TTTACCGGCC GTGACGAATA CCTCTATGCG
GATCCCGGCA CATCGTATTC AAGTACAAAT GATGTCGAAC ATAAAGGTGC GCAAGCCCAG
CTCACCTATG ACGATGAGTC GTTGCGGGTT ACCGCCGGTG TGGACTGGAT CAGATATGAT
CTTGAGTCTA CACTCGCCCC CTATTCTTCA GAATATGAAA ACCCGGCATA TTTTCTTCTT
GGCAAGTATG GCTTCATGTC AGACAGACTC GTGCTTACAG CAGGTCTTCG TTATGATCAA
TATGACGTAA CCATTTCAGA GGGGCAGGGT TCTTCAAGAA GAACCGATAA CCTTGCCGAA
CAGGTTGGGC TGGCCTGGAA TGTATCAGAC GCGCTGAAGC TGAGAGCCTC GTATGCCGAA
GGGTTCAGGA TGCCGTCGGC AAGAGAGCTG GTCGCCGATT TTTACTCATG GGGTACTCAT
TATATCGGTA ACCCGGATCT TAAACCGGAA AAGAGCCGGT CGTACGAAGC CGGAGTTGAT
ATTGATTACC GGAATGTAAA ATCATCGCTG ACCTGGTTTA CTACGGATTT CCGGGACAAG
ATTCAATCCA CGGCCGTCGA TGGCGCTATG AGCTGGATCA ATATCGGAGG AGCGACGGTT
TCCGGACTTG AAGCGGAATT TTCATTGGCA TTGCACCCTT TCGGAGAGGA GTGGAAAATT
GAGCCGTATG TAAACTGTAC CTGGTTGACG AAGTATCGTG ATGAGGATAC AGGCGAACTC
CTGACCTATA CGCCGGACCT GTCTGCTACA ACGGGAATCA GGGTATCCGA CCAGCGAGGT
TTCAGCAGTG TTTTTAATCT CGCTTATACC GGAGAAACAC GAGTTCAGAA CTGGGAGGAC
TGGTCAGGTG ATATTGTTGT CAAGGGGGGA TATGCCGTAG CTAACATATC GGTTTCGAAA
AAGTTTCTTG TTGATGAGGA TAAAAAGAAC GGCAGAGGGA TAACCATCAA GGGCGAGATC
GATAATCTCT TCGATCGCGA ATTTCAGTAC GTAAAAGGCT ATACCATGCC TGGACGTACA
TTTACTATCG GCCTTGGAGC TGATATTTAG
 
Protein sequence
MNKKIFLIVM AGLLCSKGLL AEEMVKSYTG DEVVVTSSRV EESKKNVTSS ITVIGREEIE 
QSSAHDLGEL LAEKSIGHIQ KYPGTMTSVG IRGFRTETHG NDLMGKVLVL LNGRRAGTGN
LAKISTGNIE RIEIIRGPAA VQYGSAAIGG IVNVITSRGN GKPGLFFKQE FGSNDYTRTT
MGADGKSAGV DYSGSVSFSD AGDYKTGAGD EYKNTGYSDR TVGNVNIGYE FLPHHRIGVI
YNYFDVRKAG SPSYLSQNDL DAYTSQKAYS TDFIYEGSTG NRRFSWMARY FTGRDEYLYA
DPGTSYSSTN DVEHKGAQAQ LTYDDESLRV TAGVDWIRYD LESTLAPYSS EYENPAYFLL
GKYGFMSDRL VLTAGLRYDQ YDVTISEGQG SSRRTDNLAE QVGLAWNVSD ALKLRASYAE
GFRMPSAREL VADFYSWGTH YIGNPDLKPE KSRSYEAGVD IDYRNVKSSL TWFTTDFRDK
IQSTAVDGAM SWINIGGATV SGLEAEFSLA LHPFGEEWKI EPYVNCTWLT KYRDEDTGEL
LTYTPDLSAT TGIRVSDQRG FSSVFNLAYT GETRVQNWED WSGDIVVKGG YAVANISVSK
KFLVDEDKKN GRGITIKGEI DNLFDREFQY VKGYTMPGRT FTIGLGADI