Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1115 |
Symbol | |
ID | 4570155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 1260809 |
End bp | 1262758 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639765711 |
Product | TonB-dependent receptor |
Protein accession | YP_911579 |
Protein GI | 119356935 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4206] Outer membrane cobalamin receptor protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.95294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACAAAA AAATTTTTCT TATCGTGATG GCCGGGCTGC TGTGCAGCAA AGGACTTCTT GCCGAAGAGA TGGTAAAAAG CTATACCGGG GATGAGGTTG TGGTGACTTC AAGCCGTGTA GAGGAGTCTA AAAAAAATGT AACCTCCAGT ATTACCGTTA TTGGCAGGGA AGAGATCGAA CAATCATCTG CTCACGATCT CGGTGAATTG CTTGCGGAAA AAAGCATTGG GCATATCCAG AAATATCCAG GCACCATGAC ATCGGTTGGT ATCAGGGGAT TCAGGACCGA GACGCATGGT AACGATCTTA TGGGCAAGGT GCTTGTGCTT CTCAATGGCC GGCGCGCGGG TACCGGCAAC CTTGCCAAAA TTTCGACGGG GAATATAGAA CGTATTGAGA TTATTCGTGG CCCGGCTGCA GTGCAATACG GTTCTGCTGC CATAGGAGGT ATCGTTAACG TTATCACCTC AAGGGGAAAC GGAAAACCGG GATTGTTTTT TAAACAGGAA TTCGGGAGCA ATGATTACAC CCGGACGACC ATGGGGGCCG ATGGCAAATC AGCCGGGGTT GATTATTCGG GCAGTGTTTC TTTTTCTGAT GCGGGTGATT ATAAGACCGG TGCAGGAGAT GAATACAAAA ATACCGGTTA CAGTGACAGG ACGGTCGGAA ATGTGAATAT CGGTTACGAG TTTCTGCCCC ATCACAGAAT AGGCGTGATA TACAATTATT TCGATGTCAG AAAAGCAGGT TCCCCATCAT ATCTGAGTCA GAATGATTTG GATGCATATA CCAGTCAGAA AGCATATTCT ACCGATTTTA TCTATGAGGG CTCTACCGGG AACCGGCGTT TTTCATGGAT GGCTCGTTAT TTTACCGGCC GTGACGAATA CCTCTATGCG GATCCCGGCA CATCGTATTC AAGTACAAAT GATGTCGAAC ATAAAGGTGC GCAAGCCCAG CTCACCTATG ACGATGAGTC GTTGCGGGTT ACCGCCGGTG TGGACTGGAT CAGATATGAT CTTGAGTCTA CACTCGCCCC CTATTCTTCA GAATATGAAA ACCCGGCATA TTTTCTTCTT GGCAAGTATG GCTTCATGTC AGACAGACTC GTGCTTACAG CAGGTCTTCG TTATGATCAA TATGACGTAA CCATTTCAGA GGGGCAGGGT TCTTCAAGAA GAACCGATAA CCTTGCCGAA CAGGTTGGGC TGGCCTGGAA TGTATCAGAC GCGCTGAAGC TGAGAGCCTC GTATGCCGAA GGGTTCAGGA TGCCGTCGGC AAGAGAGCTG GTCGCCGATT TTTACTCATG GGGTACTCAT TATATCGGTA ACCCGGATCT TAAACCGGAA AAGAGCCGGT CGTACGAAGC CGGAGTTGAT ATTGATTACC GGAATGTAAA ATCATCGCTG ACCTGGTTTA CTACGGATTT CCGGGACAAG ATTCAATCCA CGGCCGTCGA TGGCGCTATG AGCTGGATCA ATATCGGAGG AGCGACGGTT TCCGGACTTG AAGCGGAATT TTCATTGGCA TTGCACCCTT TCGGAGAGGA GTGGAAAATT GAGCCGTATG TAAACTGTAC CTGGTTGACG AAGTATCGTG ATGAGGATAC AGGCGAACTC CTGACCTATA CGCCGGACCT GTCTGCTACA ACGGGAATCA GGGTATCCGA CCAGCGAGGT TTCAGCAGTG TTTTTAATCT CGCTTATACC GGAGAAACAC GAGTTCAGAA CTGGGAGGAC TGGTCAGGTG ATATTGTTGT CAAGGGGGGA TATGCCGTAG CTAACATATC GGTTTCGAAA AAGTTTCTTG TTGATGAGGA TAAAAAGAAC GGCAGAGGGA TAACCATCAA GGGCGAGATC GATAATCTCT TCGATCGCGA ATTTCAGTAC GTAAAAGGCT ATACCATGCC TGGACGTACA TTTACTATCG GCCTTGGAGC TGATATTTAG
|
Protein sequence | MNKKIFLIVM AGLLCSKGLL AEEMVKSYTG DEVVVTSSRV EESKKNVTSS ITVIGREEIE QSSAHDLGEL LAEKSIGHIQ KYPGTMTSVG IRGFRTETHG NDLMGKVLVL LNGRRAGTGN LAKISTGNIE RIEIIRGPAA VQYGSAAIGG IVNVITSRGN GKPGLFFKQE FGSNDYTRTT MGADGKSAGV DYSGSVSFSD AGDYKTGAGD EYKNTGYSDR TVGNVNIGYE FLPHHRIGVI YNYFDVRKAG SPSYLSQNDL DAYTSQKAYS TDFIYEGSTG NRRFSWMARY FTGRDEYLYA DPGTSYSSTN DVEHKGAQAQ LTYDDESLRV TAGVDWIRYD LESTLAPYSS EYENPAYFLL GKYGFMSDRL VLTAGLRYDQ YDVTISEGQG SSRRTDNLAE QVGLAWNVSD ALKLRASYAE GFRMPSAREL VADFYSWGTH YIGNPDLKPE KSRSYEAGVD IDYRNVKSSL TWFTTDFRDK IQSTAVDGAM SWINIGGATV SGLEAEFSLA LHPFGEEWKI EPYVNCTWLT KYRDEDTGEL LTYTPDLSAT TGIRVSDQRG FSSVFNLAYT GETRVQNWED WSGDIVVKGG YAVANISVSK KFLVDEDKKN GRGITIKGEI DNLFDREFQY VKGYTMPGRT FTIGLGADI
|
| |