| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1089 |
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| Symbol | |
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| ID | 4570033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 1233048 |
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| End bp | 1234628 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639765686 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_911554 |
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| Protein GI | 119356910 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR00719] L-serine dehydratase, iron-sulfur-dependent, beta subunit
[TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.150639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAC TGATCACTGA TGGTGTCGAT CCGCAATGTG CTCAAATTCT CAAGCAGAAT
GGCTTTGAGG TCACTGAAAT ACCTAAAATC AGCAAGGAAG AACTCAAAGA GATCATCGGG
AACTTTGACA AACTTATCGT CAGAAGTGCA ACAAAAGTTA CGGCTGAAAT CATTGAGCTG
GGAAAAAAAC TGAAATTGAT CGGTCGAGCC GGAGCCGGAG TTGATAACAT CGACATCGAA
GCCGCAACAC GCAACGGCAT TATTGTCATG AATACACCCG GAGGCAACAC GATCTCTGCC
GCAGAGCATA CCTGCGGAAT GATGCTTGCC GCTGCCCGCC AAATCCCGCA GGCAACCGCA
GAATTAAAAA ACGGTAAATG GGACAAGAAA AAATTCATGG GAGTTGAGCT TGACGGAAAA
ACACTCTCCA TTATCGGCCT GGGTAAAATC GGTCGTGAAG TTGCCTTCCG CATGCAGGCT
TTCGGAATGA AAACCATTGC ATACGACCCC ATGATCCCCG ACGAATATGC AGCACATCTT
AACATCGCAC TGCTTCCGCT GCATGAAAAC TTCAAGCAGG CCGACTTCAT TACCATTCAC
TCCTCTCTCA ACGAATCAAC GAGAAACCTT ATTGCCAATG ACACTTTTGC CCTGATGAAA
CAAGGGGTAA TTATCGTCAA TTGCGCACGG GGCGGCATCA TCAATGAGGC GGATCTCGCT
GAGGCAATTG CGTCAGGAAA AGTCGGCGCC GCAGCTCTCG ACGTTTTCGA AACAGAACCT
GTTCAGCAGG ATAATCCCCT CTTAAAGCTC GAACGTGTTG TTGCAACGCC GCACATCGCA
GCATCGACCA ATGAAGCGCA GGTGAAAGTC GCCGTACAGA TCGCCGAACA GATTGTTGAG
TGGAAACAAA AAGGAAAACT CGAAGGCGCA GTCAATGCCT CGGCAGTTGA ACTGGCACAA
ACACCCGGTG TCCGATCATA CCTTGCACTT GCTGAAAAGC TTGGAGCAAC GCTTGCCCAG
CTTACTGCGA TTCAAGCCAA TAAAATCGTC GTCACAACAT CCGGCGAATT TCTTCAAAAG
TTCAGCGAGG TCATTACAGC CGCAGCATTG AAAGGATTTC TCGATATCCG CCAGACAAAA
GACACCAACT ATATCAATGT CTTTACCATG GCTAAAGAAA CCGGAATCAC CCTTGAACAG
AAATTCGAAA AAGAAAACCC CGATTACACG AACCTTATCA GAATCGAACT TGAAAATGGA
GCGACCAAGC GCATGATCGG TGGCACTGTT TTTGGCGACA AGGAGCTGAG AATTGTGATG
ATCGACCGGT TTATTGTTGA GTTTAAACCA GAAGGCACCA TTATCATATA CAATAACATC
GATCAACCCG GCGTTATTGC TCAGGTCACG CAACTGCTCC TGCTGCATAA CCTGAACGTC
GCATCAATTG CGCTCTCAAG AGATGAAGAA AAGAAACTTG CCATAACCGC TATTGTTGTT
GATGGCGGGG TGACAACGAC TTTGCTCGAT GAAATAAGTA CGGTCAACGG AGTTTCAGAC
TCAACGCTTC TCTCTCTGTA A
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| Protein sequence | MKVLITDGVD PQCAQILKQN GFEVTEIPKI SKEELKEIIG NFDKLIVRSA TKVTAEIIEL
GKKLKLIGRA GAGVDNIDIE AATRNGIIVM NTPGGNTISA AEHTCGMMLA AARQIPQATA
ELKNGKWDKK KFMGVELDGK TLSIIGLGKI GREVAFRMQA FGMKTIAYDP MIPDEYAAHL
NIALLPLHEN FKQADFITIH SSLNESTRNL IANDTFALMK QGVIIVNCAR GGIINEADLA
EAIASGKVGA AALDVFETEP VQQDNPLLKL ERVVATPHIA ASTNEAQVKV AVQIAEQIVE
WKQKGKLEGA VNASAVELAQ TPGVRSYLAL AEKLGATLAQ LTAIQANKIV VTTSGEFLQK
FSEVITAAAL KGFLDIRQTK DTNYINVFTM AKETGITLEQ KFEKENPDYT NLIRIELENG
ATKRMIGGTV FGDKELRIVM IDRFIVEFKP EGTIIIYNNI DQPGVIAQVT QLLLLHNLNV
ASIALSRDEE KKLAITAIVV DGGVTTTLLD EISTVNGVSD STLLSL
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