| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1087 |
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| Symbol | |
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| ID | 4570031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | + |
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| Start bp | 1229626 |
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| End bp | 1231578 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639765684 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_911552 |
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| Protein GI | 119356908 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.106498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAACC GACCGATAGT GTTCTGCGGA ACAGCAACAG AGAGTTTCAG TAATCCCCCA
GATAACGTTA GGTTGATAGT GAAGAGACGG ATTTATTACA CATTGATGAC GGCCTGGTTG
TCGCTATCGG CTATTCTTTT TTCCGCAGAG TCTCTCCTTG CAAGGAATTC TCGTGACGAT
AGAGATGGCA ATTCCGGAAA AACATCCGTA ACGGAGATTC TCGACAGCCT TGTTTACACC
ACGTATTTCA AGGATGAGCA TTTTTCTCCT TCAAAAAAAG AGCCCTATCG TCCCGGTTTA
CCCAGCCATT TTGTTCCCCA GTTCAGCGAT TCGGTCTATG CGGCAAGGAT ATCAGCCCTG
GATCGTAAAA CTGCGTTTAA TCTGGTTTAT AACGAGCATG TGAGGGGATT TATCAGGATT
TATGCTGTTG ACAAGCGAAA CATGACTGCC AAGATTCTTG GGCTCAGCAA GATTTATTTT
CCGCTTTTCG AAGAGAATCT TGAACGGTAC AATGTTCCCC TTGAGATGAA ATACCTTGCT
ATCGTTGAGT CGGCATTAAA TCCCACAGCC GTTTCTTCCG CAGGTGCCAG AGGGTTGTGG
CAGTTCATGT ATGGGACAGG CAAGATGTAT GGTCTTGAGA CCTCTTCATT TATTGAAGAT
CGCTATGATC CCTACAAGGC TACTGCTGCG GCAAGCAAGC ACCTTCGGGA TCTTTACAAT
ATTTATGGAG ACTGGTTTCT CGCCCTTGCA GCCTATAACT CAGGGCCGGG AAACGTAAAC
AAGGCGATCC GTCGGGCAGG AGGTATCAAG AACTACTGGG CAATATGGAA CTATCTTCCT
GCTGAAACGC GCGGGTATGT GCCGGCTTTT ATTGCCGTCA ATTACATTAT GAATTACTAT
AAAGAGCACA ATATTCAGCC GATAGAGCCG GGTTTTCTCT ACAATGAAAT TGACGCACTG
AAAATCACAA GGCTTGTTTC GTTTGAACAG ATCAACGAGA CGATCGGCGT GCCGATGAAA
GATCTCCAGT TTCTCAATCC CCAGTATAAG CTTGGTCTTA TACCGGGCAC TTCCTATAGC
GGCAATATGC TGAGGCTTCC GAGAAAATAT GTCGGTCAGT TTCAGCGTCG CGAAGAAGAG
ATTTATGCTT ATAAATCCGA GCAGGTTATT GAGCGGGCTC AGCTTCTTGC AAGAGTCCAG
AGTATGGATG GAGGAGGATC GGTAAGTTCA GCCCAGAGTG CGGGCGGAAC GATGAGAATG
AAAATGCATG AGGTTCGACA GGGCGAAACA CTTGGCTCGA TAGCTCGTGT GTATCGATGT
GATGTCAGTC AGCTTATCCG CTGGAATGAC CTTAAAGTCT CCGAGGTTTC TCCAGGGCAG
CGCCTCATTG TTTTTGCGGT GCCTGAAAGC TCCACTGCCC AGGGGGTATC GGTACAGCAG
ACCGCCTCTG CCCGGGGATT ATCTGCGCCA TTGCTTCCTG CGCCGATTTT TCCTCCCGAA
CAGGTTCAGC GGCAAGCGCC AATTGTTATG AAGCCGAGAG CTCAGGAACC AAAAGCCCAG
GAGCAGAAGG TTGCTTTGCG AAAAGAAAAA ATTCAAAACC ATAAGGTTAA AAAAGGGGAG
ACCGTTGCCT CAATTTCCCG CCAATATGGA GTGAGTTCCG AAAGTATTGC CGAGCTGAAT
AATTTGAGCG GCAGAAAACA GATTCGGCCT GGACAGGTGC TGAAAATAAC CGGCAAGGCA
TCGTCAGCAA AATCAGAAGC TCGCATATCT TCAGCAAAAA AAGAGTCAGG ATCTTCTCGA
AGCCATAAAT ATCACAAGGT TAAAAAGGGG GAAACTCTTT CATCGATAGC CGATAAGTAT
GCTTTGAGTG TTTCGGAGCT GAGCAAAAAA AACAATCTCG GAAAGAAAAA ACTTATACGC
CCAGGACAGA AACTCAATGT TACCCGCGAG TAG
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| Protein sequence | MLNRPIVFCG TATESFSNPP DNVRLIVKRR IYYTLMTAWL SLSAILFSAE SLLARNSRDD
RDGNSGKTSV TEILDSLVYT TYFKDEHFSP SKKEPYRPGL PSHFVPQFSD SVYAARISAL
DRKTAFNLVY NEHVRGFIRI YAVDKRNMTA KILGLSKIYF PLFEENLERY NVPLEMKYLA
IVESALNPTA VSSAGARGLW QFMYGTGKMY GLETSSFIED RYDPYKATAA ASKHLRDLYN
IYGDWFLALA AYNSGPGNVN KAIRRAGGIK NYWAIWNYLP AETRGYVPAF IAVNYIMNYY
KEHNIQPIEP GFLYNEIDAL KITRLVSFEQ INETIGVPMK DLQFLNPQYK LGLIPGTSYS
GNMLRLPRKY VGQFQRREEE IYAYKSEQVI ERAQLLARVQ SMDGGGSVSS AQSAGGTMRM
KMHEVRQGET LGSIARVYRC DVSQLIRWND LKVSEVSPGQ RLIVFAVPES STAQGVSVQQ
TASARGLSAP LLPAPIFPPE QVQRQAPIVM KPRAQEPKAQ EQKVALRKEK IQNHKVKKGE
TVASISRQYG VSSESIAELN NLSGRKQIRP GQVLKITGKA SSAKSEARIS SAKKESGSSR
SHKYHKVKKG ETLSSIADKY ALSVSELSKK NNLGKKKLIR PGQKLNVTRE
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