| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0972 |
|---|
| Symbol | |
|---|
| ID | 4570875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | + |
|---|
| Start bp | 1114304 |
|---|
| End bp | 1115386 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639765575 |
|---|
| Product | hydrogenase (NiFe) small subunit HydA |
|---|
| Protein accession | YP_911444 |
|---|
| Protein GI | 119356800 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
|---|
| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00108314 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAA ACCAGTCTTT TGCCGATATT TTCAGGGCCA GTGGCGTGAG TCGAAGAGAT
TTTTTAAAGT TCTGCTCACT TACATCGGTT TATCTTGGTC TTTCCCCTTC GATGGTACCG
AGTATTGTTC AGGCCATGGA AACAAAGCCA AGAACTCCGG TTATCTGGCT GCATGGTCTT
GAGTGTACCT GCTGTTCCGA ATCGTTTATC CGCTCCTCTC ATCCTACTAT CGAAGACATC
ATTTTCAATA TGATTTCACT CGATTATGAT GATGTTCTCA GCGCAGCGGC AGGTCATCAG
CTTGAGGATG TCCGAAAGAA GACGATGACC GATTATAAAG GGAAATATAT TCTTGCCGTT
GAGGGAAATG TGTCAACGAA AGACGATGGC GTGTACTGTA TGGTGGGTGG CGATTCTTTT
CTCAATACGC TCAGGGAGAC AGCCGCTGAT GCTGCCGCAA TTATTGCATG GGGCGCTTGT
GCTTCATTCG GTTGTGTGCA GAATGCCGAT CCGAACCCTA CAGGGGCCGC ACCGATTTCA
GAGATTATAA AGGATAAACC TATCGTCAAT GTCCCCGGCT GCCCTCCGAT TGCCGAGGTT
ATGACCGGAG TTATTACGCA TTTTCACACA TTCGGTAAAC TGCCCGACCT TGACCGCTTC
AATCGTCCCA AGGCTTTTTA TAAAACGAGG ATTCATGATA AATGCTATCG TCGTGCATTT
TTTGATGCCG GCATGTTTGT CAGAAGCTTC GATGATGAAT CGACCAGAAA AGGGTGGTGC
CTCTATAAGA TGGGTTGCAA GGGACCGACA ACCTATAACT CATGTTCGAC GATTCAGTGG
AATGACGGGA CAAGTTTTCC GATCGGTTCG GGCCACCCCT GTATCGGCTG CTCAGAACCG
CATTTCTGGG ACAATGGGCC TTTCTACAAG AGACTTGCCG ATGTATCGTT CCTTGGCTCT
GATAGCAATG CGGACAGAAT CGGAGCTGTG GCGCTTGGAG CTGCGGCGGC CGGAGCTGCG
GCACATGCGA CGATTACGGC AATTAAAAAG GGAAAATCAG GTAAAGGTAA TGACAAAGCT
TAA
|
|---|
| Protein sequence | MQKNQSFADI FRASGVSRRD FLKFCSLTSV YLGLSPSMVP SIVQAMETKP RTPVIWLHGL
ECTCCSESFI RSSHPTIEDI IFNMISLDYD DVLSAAAGHQ LEDVRKKTMT DYKGKYILAV
EGNVSTKDDG VYCMVGGDSF LNTLRETAAD AAAIIAWGAC ASFGCVQNAD PNPTGAAPIS
EIIKDKPIVN VPGCPPIAEV MTGVITHFHT FGKLPDLDRF NRPKAFYKTR IHDKCYRRAF
FDAGMFVRSF DDESTRKGWC LYKMGCKGPT TYNSCSTIQW NDGTSFPIGS GHPCIGCSEP
HFWDNGPFYK RLADVSFLGS DSNADRIGAV ALGAAAAGAA AHATITAIKK GKSGKGNDKA
|
|---|
| |