Gene Cpha266_0969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0969 
Symbol 
ID4570872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1108387 
End bp1110666 
Gene Length2280 bp 
Protein Length759 aa 
Translation table11 
GC content48% 
IMG OID639765572 
Productproton-translocating NADH-quinone oxidoreductase, chain L 
Protein accessionYP_911441 
Protein GI119356797 
COG category[P] Inorganic ion transport and metabolism
[C] Energy production and conversion 
COG ID[COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 
TIGRFAM ID[TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00014024 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAGTT TAATTCAGTT ATCAATAGTC GTACTGCTGC TGCCATTGCT CTCGTTTGTC 
ATTCTCATTT TTTTTAACCG GCGTCTTCCG GGAAGAGGGG ATTTCATCGG GGTAGGGATT
CTCGGCGCAG CGTTTGCTCT ATCCGCATAT ATCTTTTGGT CTGTTATTGT ACAGGCGTAT
GATCCGCTTT TTAAAATAGC ATGGAGCTTT ACCTGGATTG ATCTCGGGAT GGTTCCGGGA
GTAGGTCCGC TGAAAATCAA CATGGGTATT GTTATTGATA ACCTGACGGC TATCATGCTT
ACAATGGTGA CGCTTATCAG TTTGCTTGTT CATATCTATT CGACAGGTTA TATGGCAGGC
GACAAGCACT ACGGCCGATA TTTTGCCTAT CTCGGTATCT TTACTTTTTC GATGCTTGGT
ATTGTTCTGT CCGACAATCT GTTTTCGATC TATATGTTCT GGGAGCTGGT CGGTCTTTCT
TCCTACCTCC TGATCGGCTT TTTCTTTGAA AAAGACAGCG CTGCTGATGC CCAGAAAAAA
GCTTTTCTTG CCAACCGTGT TGGTGATATA GGAATGTGGC TCGGTATTCT TATTCTCTAT
TCCCAGTTTC ACACCTTCAA TTACGACGAT ATTTTCGGGG CTCTTGCTGC GGGGAAGTTC
ACGCTCTCTC AAGGATGGTT GACCGCGGCA GGTATTCTTC TCTTCATGGG CTGTGTCGGT
AAATCGGCGC AGTTTCCTCT TCATGTATGG CTTCCCGATG CAATGGAAGG TCCTACCCCG
GTATCCGCAC TTATTCACGC TGCAACCATG GTCGCAGCCG GCGTTTACTT TGTCGCTCGT
ATTTTTGTGC TTTTGACCCC TGATGCCCTG CATGTCATCT CGTTTATTGG AGCGTTTACA
GCATTTATGG CAGCCACGAT TGCCATTACC CAGAACGATA TTAAAAGAGT GCTGGCCTAC
TCAACGGTTT CCCAGCTTGG CTATATGGTG CTTGGCCTTG GAGTCGGAGC TTACTCCGCA
GCTTTGTTTC ATCTTGTTAC GCATGCGTTT TTCAAGGCAT GTCTTTTTCT TGGATCCGGT
GCAATTATTC ACGCCATGCA TCATGAGCAG GATATGCGCT GGATGGGCGG TCTGCGCAAA
CCGATGCCAT GGACCTTCGT TACCTTTACG ATTGCAACCC TTGCTCTTGC CGGCCTTCCA
CTGACAAGTG GTTTTATGAG CAAAGACGCC ATTCTTGCCG GTGCCATAGG CTTTGCTGAA
GCTGAGGGCG GCGGGATCTA CTATCTGATT CCGGTTCTCG GCTTTTTTTC AGCCATGCTG
ACGGCTTTTT ATATGGGACG CCAAATCTGG CTGGTCTTTT TTGGAGATAG CCGTACCCAT
CTGAAACCTG CCGAACATCA TGCTCACGGT CATGACGCTC ATCATGGTCA CGATGATGAA
CACGGCGGGG ATCATGGTGT TCATGAAGTA TCCTGGAATA TGAGGGCTCC TCTTGTCGTT
CTTGCCGCGC TTTCAGTTTT TGCTGTTTAC TCTCCGGATC CACTTGATGG AGCCAAAGGC
TGGTTCATGA GCATGGTTCA GACTCCCGAG ACAGTTGTGG GCGACAAGCC GCCGGTTGAG
CATACCGTCC TGACTGAGGG TAACAGTGGG AATCTGCTCC TTGCAGAATC TGTTGATCAC
ACAGAGCTGC CTCATGGTAC CGATGTTTCT CACATGCCTG TTGCGGCAAC TCACGGTGCT
ACGGAGGGCG ATCATCACAC CGGTCACACG TTTGCTGATC CAAGACAGGC AGCTATTGCT
CATGGCGCAC ATGAAGCTCA CAATCCGGCT ATCATCATAT CAAGCATTAT GGTCGCGCTT
GGAATCAGTA TGGCCGGCAT TGTTTATGTC TTCAAGGTTA TCGATCCCGA CAGTACCGCC
CGGAATATCC GTCCCCTTTA TCTCTTTTCA TTGAACAAGT GGTACTGGGA CGAAATATAT
GATGCGACCG TCATCAAAGG CTCAATACTG ATTTCGAAAA TATTTGCCTG GTTTGACAGC
AACATCATTG ACGGCCTTGT TAACGGTATT GCCGTGACCG TCAGAAAATT CGCATTTGCA
AATGGTAGCT TTGACAAATA TGTTGTTGAC GGACTTGTGA ATTTTACCGC ATTTTTTGTC
AATACCAGTG GTGCACTGCT CAGAAAATTT CAGACCGGAA AGGTGCAGAC CTATGTAGTA
CTCCTTATGA TTGCTGTTTG CGGCTATTTT GTCTATTACT TTACACAACT GGTCTATTAA
 
Protein sequence
MHSLIQLSIV VLLLPLLSFV ILIFFNRRLP GRGDFIGVGI LGAAFALSAY IFWSVIVQAY 
DPLFKIAWSF TWIDLGMVPG VGPLKINMGI VIDNLTAIML TMVTLISLLV HIYSTGYMAG
DKHYGRYFAY LGIFTFSMLG IVLSDNLFSI YMFWELVGLS SYLLIGFFFE KDSAADAQKK
AFLANRVGDI GMWLGILILY SQFHTFNYDD IFGALAAGKF TLSQGWLTAA GILLFMGCVG
KSAQFPLHVW LPDAMEGPTP VSALIHAATM VAAGVYFVAR IFVLLTPDAL HVISFIGAFT
AFMAATIAIT QNDIKRVLAY STVSQLGYMV LGLGVGAYSA ALFHLVTHAF FKACLFLGSG
AIIHAMHHEQ DMRWMGGLRK PMPWTFVTFT IATLALAGLP LTSGFMSKDA ILAGAIGFAE
AEGGGIYYLI PVLGFFSAML TAFYMGRQIW LVFFGDSRTH LKPAEHHAHG HDAHHGHDDE
HGGDHGVHEV SWNMRAPLVV LAALSVFAVY SPDPLDGAKG WFMSMVQTPE TVVGDKPPVE
HTVLTEGNSG NLLLAESVDH TELPHGTDVS HMPVAATHGA TEGDHHTGHT FADPRQAAIA
HGAHEAHNPA IIISSIMVAL GISMAGIVYV FKVIDPDSTA RNIRPLYLFS LNKWYWDEIY
DATVIKGSIL ISKIFAWFDS NIIDGLVNGI AVTVRKFAFA NGSFDKYVVD GLVNFTAFFV
NTSGALLRKF QTGKVQTYVV LLMIAVCGYF VYYFTQLVY