Gene Cpha266_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0879 
Symbol 
ID4570473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1003324 
End bp1004340 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content51% 
IMG OID639765474 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_911351 
Protein GI119356707 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA TTCTTGAACT GAAAGAGCTC AAAACATGGT ACTCCACATC GGCCGGGATA 
GCAAAGGCTG TTGACGGCGT AAGTTTTTCG CTCGACAAAA ATCAGACGCT CGGGGTTGTT
GGCGAATCAG GGTGCGGAAA ATCCGTTACG GCGCTCTCGG TTATGCGGCT TGTTCCCATG
CCTCCCGGAT ATTTTGCCGG GGGAGAGATT CTCTGGAAAG GCAAGAATCT CCTGACCATT
CCTGAAGAGG AGATGCGCCG GTTAAGAGGT AATGAGATCT CCATGATTTT TCAGGAACCG
ATGAGTTCTC TTAATCCGGT GTTTACCTGT GGCGCCCAGA TTATGGAACA GATTCTTGTC
CATCGTCCCG TAACACAGAG TGAAGCCAAA GCCCGATCGG TTGAGCTGCT TCACCTTGTG
GGAATACCGA ATCCTCTGGA GCGTTTCTCC TCATACCCCC ATGAGCTTTC AGGCGGTATG
CGCCAGCGGG TGATGATTGC CATGGCGCTC TCCTGTAATC CCCAGCTCCT TATAGCAGAT
GAGCCGACAA CGGCACTCGA TGTCACGGTT CAGGCCCAGA TACTGGATCT TATCGGTACC
CTTCAGGCTG ATACCGGCAT GAGTGTCATG CTGATAACCC ATGACTTCGG AGTTGTCGCC
GAGCTTTGTC AGGAGGTTAT CGTGATGTAT GCGTCAAGGG TCGTTGAGAA AGGTCGCGTC
GACCAGATTT TCAGTAACCC CATGCATCCC TATACCCGAG GTCTTTTGAA CTCCATTCCG
AGACTGGGAT CCCGCAATGA ACGACTTCAT GTTATTGAGG GAAATGTGCC CAGTGCGATT
AATCTGCCTG ATGGCTGCCG TTTTGCAGGA CGTTGTCCTT TTGCCGAAGC GCAGTGCAGA
GAAAAACAAC CGCTGCTTGA ACTCTGTGAA GCTGGCCATG AAGTTGCATG CTGGAAAGCC
ATCGATTCCA CCTATGCAGA TGAAATAAAA AGCAGACTGA TGCAAAACAT TATCTGA
 
Protein sequence
MEKILELKEL KTWYSTSAGI AKAVDGVSFS LDKNQTLGVV GESGCGKSVT ALSVMRLVPM 
PPGYFAGGEI LWKGKNLLTI PEEEMRRLRG NEISMIFQEP MSSLNPVFTC GAQIMEQILV
HRPVTQSEAK ARSVELLHLV GIPNPLERFS SYPHELSGGM RQRVMIAMAL SCNPQLLIAD
EPTTALDVTV QAQILDLIGT LQADTGMSVM LITHDFGVVA ELCQEVIVMY ASRVVEKGRV
DQIFSNPMHP YTRGLLNSIP RLGSRNERLH VIEGNVPSAI NLPDGCRFAG RCPFAEAQCR
EKQPLLELCE AGHEVACWKA IDSTYADEIK SRLMQNII