Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_0874 |
Symbol | |
ID | 4570468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 995379 |
End bp | 996890 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639765469 |
Product | amine oxidase |
Protein accession | YP_911346 |
Protein GI | 119356702 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR02730] carotene isomerase [TIGR02734] phytoene desaturase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATAAAA GCGCAGACGT CATTATTGTC GGTTCAGGTA TCGGTGGACT AACGGTTGGA GCTCTGTTAC AGCAGCAGGG GATTTCAACC CTTGTTTTTG AGCAAAACAG TGTTCCTGGC GGGAGTTGTT CTTCATTTTC AAGGAATGGT TACAGGTTTG ATGCCGGAGC GTCAGTCTTT TACGGGTTTG GCGATGACCT GAGCAGCGGT ACGCTTAATC TTCATACCAG AATTTTCCGC AAGCTTGGCA TTGATGTTAA AACGGTTCAT GACCCTGTTC AAATTCATTA TCATCTGCCT GGCGGGTTTG CTCTTCCAGC GCACTATAGT CGGAAACTGT TTCTTGATTC GCTTCAGGAT CGATTTCCCC ATGAAGGAGA AGGTATTAAA AAGTTTTATG ATGAACTGGA AGCTGTGTAC GATATTCTGA GTTCATTGCC TGCCGGTTCT CTTGAGGATC TCATGCATCT TGCCCAGGTA GGTTTGACCT ATCCAGGCAA GACGTTTACC CTTGCTATGA AAACCTTTCG CTCAATGGGC AAGACTGCAC GGAAATATAT CAGTGATGAA GAGCTGTTGA GGTTTATCGA TATTGAGTCT TACTCATGGG CGTTACAGAA TGCGTTGTCA ACTCCGCTTG TCAATGCCGG AATCTGTCTT GCAGACAGAC ATCATGGAGG CATTAACTAC CCTGTCGGAG GTTCAGGGGT TATTGCTGAG GGATTGGTCA GGGGAATAGA AAAATATGGC GGAACAGTCC GCTACCGTTC AGAAGTTGTT GAGATTCTTG TTGAAGGGGG GAGCGCCCAT GGCGTTAAGC TCGCAAACGG CGAGTGCTGT TATGCCGATG TTGTTGTCAG TAATGCGACG GTCTGGGATA CCTTTAACAG GCTCGTACCG GATCCACGGT ATCATGTTGC TGAAGAGAAG TTTCAACGGG CCCCAAGCTG GTTTCAACTC TATCTTGGAG TGGATGGTTC GGTTATTCCT GAAGGGTTTC ATGTTCATCA TGTTCTCGTT GAGGACTGGA AGCGGTATGA TCAGACGGGA GGGACAATTT ATTTTTCTGC TCCCACTCTT CTCGATCCAT CGCTTGCTCC GTCAGGCAAA CATATCGTAC ACCTTTTTGT TACTGCCGAA ACCTCCGAGT GGGAGAGTTT TGAGAAAAGT AATGGTCAAT ATCTGAAAGC AAAGGAGGCT TTTGCCAGAA CGGTGATAGC CCGAACGGAA AAGATACTTC CCGGACTTGC GGATTCGATC GAACTCCAGG TGTTTGCAAC GCCCTCGACT CATGAACGCT ATCTCAACCG GTACAAAGGA TCGTATGGCC CGTTGCTCTG GCCCGGCCAG AATGTGTTGC AGAAACCTCA AAACCTTACC AGGGTTAAAA ATCTGCTTGC GGTCGGCGAT AGTACTTTTC CTGGACAGGG AGTTATTGCT GTGACCTATT CAGGCGTTTC ATGTGCCTCC TATATTGCCC GACAGATGGG TAAGCCGCTT GCATATCTCT GA
|
Protein sequence | MHKSADVIIV GSGIGGLTVG ALLQQQGIST LVFEQNSVPG GSCSSFSRNG YRFDAGASVF YGFGDDLSSG TLNLHTRIFR KLGIDVKTVH DPVQIHYHLP GGFALPAHYS RKLFLDSLQD RFPHEGEGIK KFYDELEAVY DILSSLPAGS LEDLMHLAQV GLTYPGKTFT LAMKTFRSMG KTARKYISDE ELLRFIDIES YSWALQNALS TPLVNAGICL ADRHHGGINY PVGGSGVIAE GLVRGIEKYG GTVRYRSEVV EILVEGGSAH GVKLANGECC YADVVVSNAT VWDTFNRLVP DPRYHVAEEK FQRAPSWFQL YLGVDGSVIP EGFHVHHVLV EDWKRYDQTG GTIYFSAPTL LDPSLAPSGK HIVHLFVTAE TSEWESFEKS NGQYLKAKEA FARTVIARTE KILPGLADSI ELQVFATPST HERYLNRYKG SYGPLLWPGQ NVLQKPQNLT RVKNLLAVGD STFPGQGVIA VTYSGVSCAS YIARQMGKPL AYL
|
| |