Gene Cpha266_0874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0874 
Symbol 
ID4570468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp995379 
End bp996890 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content48% 
IMG OID639765469 
Productamine oxidase 
Protein accessionYP_911346 
Protein GI119356702 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID[TIGR02730] carotene isomerase
[TIGR02734] phytoene desaturase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAAAA GCGCAGACGT CATTATTGTC GGTTCAGGTA TCGGTGGACT AACGGTTGGA 
GCTCTGTTAC AGCAGCAGGG GATTTCAACC CTTGTTTTTG AGCAAAACAG TGTTCCTGGC
GGGAGTTGTT CTTCATTTTC AAGGAATGGT TACAGGTTTG ATGCCGGAGC GTCAGTCTTT
TACGGGTTTG GCGATGACCT GAGCAGCGGT ACGCTTAATC TTCATACCAG AATTTTCCGC
AAGCTTGGCA TTGATGTTAA AACGGTTCAT GACCCTGTTC AAATTCATTA TCATCTGCCT
GGCGGGTTTG CTCTTCCAGC GCACTATAGT CGGAAACTGT TTCTTGATTC GCTTCAGGAT
CGATTTCCCC ATGAAGGAGA AGGTATTAAA AAGTTTTATG ATGAACTGGA AGCTGTGTAC
GATATTCTGA GTTCATTGCC TGCCGGTTCT CTTGAGGATC TCATGCATCT TGCCCAGGTA
GGTTTGACCT ATCCAGGCAA GACGTTTACC CTTGCTATGA AAACCTTTCG CTCAATGGGC
AAGACTGCAC GGAAATATAT CAGTGATGAA GAGCTGTTGA GGTTTATCGA TATTGAGTCT
TACTCATGGG CGTTACAGAA TGCGTTGTCA ACTCCGCTTG TCAATGCCGG AATCTGTCTT
GCAGACAGAC ATCATGGAGG CATTAACTAC CCTGTCGGAG GTTCAGGGGT TATTGCTGAG
GGATTGGTCA GGGGAATAGA AAAATATGGC GGAACAGTCC GCTACCGTTC AGAAGTTGTT
GAGATTCTTG TTGAAGGGGG GAGCGCCCAT GGCGTTAAGC TCGCAAACGG CGAGTGCTGT
TATGCCGATG TTGTTGTCAG TAATGCGACG GTCTGGGATA CCTTTAACAG GCTCGTACCG
GATCCACGGT ATCATGTTGC TGAAGAGAAG TTTCAACGGG CCCCAAGCTG GTTTCAACTC
TATCTTGGAG TGGATGGTTC GGTTATTCCT GAAGGGTTTC ATGTTCATCA TGTTCTCGTT
GAGGACTGGA AGCGGTATGA TCAGACGGGA GGGACAATTT ATTTTTCTGC TCCCACTCTT
CTCGATCCAT CGCTTGCTCC GTCAGGCAAA CATATCGTAC ACCTTTTTGT TACTGCCGAA
ACCTCCGAGT GGGAGAGTTT TGAGAAAAGT AATGGTCAAT ATCTGAAAGC AAAGGAGGCT
TTTGCCAGAA CGGTGATAGC CCGAACGGAA AAGATACTTC CCGGACTTGC GGATTCGATC
GAACTCCAGG TGTTTGCAAC GCCCTCGACT CATGAACGCT ATCTCAACCG GTACAAAGGA
TCGTATGGCC CGTTGCTCTG GCCCGGCCAG AATGTGTTGC AGAAACCTCA AAACCTTACC
AGGGTTAAAA ATCTGCTTGC GGTCGGCGAT AGTACTTTTC CTGGACAGGG AGTTATTGCT
GTGACCTATT CAGGCGTTTC ATGTGCCTCC TATATTGCCC GACAGATGGG TAAGCCGCTT
GCATATCTCT GA
 
Protein sequence
MHKSADVIIV GSGIGGLTVG ALLQQQGIST LVFEQNSVPG GSCSSFSRNG YRFDAGASVF 
YGFGDDLSSG TLNLHTRIFR KLGIDVKTVH DPVQIHYHLP GGFALPAHYS RKLFLDSLQD
RFPHEGEGIK KFYDELEAVY DILSSLPAGS LEDLMHLAQV GLTYPGKTFT LAMKTFRSMG
KTARKYISDE ELLRFIDIES YSWALQNALS TPLVNAGICL ADRHHGGINY PVGGSGVIAE
GLVRGIEKYG GTVRYRSEVV EILVEGGSAH GVKLANGECC YADVVVSNAT VWDTFNRLVP
DPRYHVAEEK FQRAPSWFQL YLGVDGSVIP EGFHVHHVLV EDWKRYDQTG GTIYFSAPTL
LDPSLAPSGK HIVHLFVTAE TSEWESFEKS NGQYLKAKEA FARTVIARTE KILPGLADSI
ELQVFATPST HERYLNRYKG SYGPLLWPGQ NVLQKPQNLT RVKNLLAVGD STFPGQGVIA
VTYSGVSCAS YIARQMGKPL AYL